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… data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of … (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from …

… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … today. Mostly, I think it all comes to explaining what a CSP is, how you apply for and get one, and what happens once … related to human health or creating vaccines, human gut microbiomes. We don’t do things related to human health. In …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … permission from the PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

The CSP Functional Genomics call is to enable users to perform …

… is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …

… along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … ecosystems.  By studying microbial communities and their interactions, the Program aims to unlock the fundamental … of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements …

… the return-to-work plan in response to the pandemic.   FY 2019 Number of Unique Users There were 1,933 unique* JGI users in FY2019 , which includes Principal Investigators (PIs), Co-PIs, … % of Goal Goal (hours)** Actual Total Actual % Goal FY 2019 Total 242.0 326.490 134.9% 8,584 8,712 101.5% Q1 2019 …

… single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … terrestrial world. Research Team    … Plant microbiomes hold the amazing ability to influence plant … 10.1073/pnas.1907500116 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot …

… coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research … 255-255 Schulz et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 … Towards a balanced view of the bacterial tree of life. Microbiome. 5 (1), 1-6 Schulz et al. (2017) Giant viruses …

DOE science mission areas of bioenergy and environmental microbiome processes.  Among the JGI’s largest dedicated … program in the DOE’s Office of Science. In December 2019, the JGI relocated to the newly-built Integrative … are at the core of many environmental processes, and the genetic makeup of microbial species and communities forms …

Lab Intellectual Property Office to facilitate these new interactions.  The PDT enables industry engagement through three primary routes:  … The CSP provides the scientific community at large with access …