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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate …
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IMG Group
… of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the … (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes …
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Metabolomics
…  Through this identification, metabolomics enables functional genome annotation, improves understanding of the role small …
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Microbial Program
Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These are derived … three domains of life. It provides tools for analyzing the functional capability of microbial communities based on …
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Synthesis
… support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, … and assembling physical DNA constructs that can then be functionally characterized.    We provide custom DNA … arrayed constructs, up to ~150 Kb in length  Pooled libraries such as sgRNA, promoter or MoClo assemblies … …
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Synthetic Biology Lab
… biosynthetic clusters, or high complexity combinatorial libraries.  We have developed and continue to improve …
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Microbiome Data Science Team
… learning approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and … the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes … of host-virus interactions, the exploration of the functional dark matter as well as the development of novel …
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Publication Policy
… and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. … analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced … for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …
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Sequencing Technologies
Staff process samples, perform quality checks, and prep libraries for sequencing. They apply Lean Six Sigma …
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DNA Synthesis Program
… solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … serves as a community resource for comparative analysis and annotation of all publicly available genomes from three …
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Natural Prodcast Episode 11: Marnix Medema
… to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on … For sure. I mean, that goes all the way back to NCBI, gene annotations and ontologies and things that — things have … and Marnix’s enthusiasm for science and excitement about creating fantastic collaborative research projects is …
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Natural Prodcast Episode 22: Alison Narayan
… sometimes enzymes that are the most similar within our libraries can have drastically different properties in terms … has to do with the mechanism. And so these enzymes use O2, and one of those oxygen atoms gets incorporated into our … interesting. ALISON NARAYAN: It is a result that has a functional benefit for us, being chemists working with …
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