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The JGI Project Management Office carries out a number of activities … to onboard users and guide them through the process of working with our facility. This includes help with: preparing a … formal User Agreement, and ultimately launching the user’s project. See below for details on each step. … Please review …

Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … to information regarding genome and metagenome sequencing projects, and their associated metadata, around the world. … …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … choice Glycerol stock of sequence verified clone depends on project DNA Synthesis Combinatorial libraries Multiple genes … and quality of finished product depend on genome. Selected genomes will be improved based on feasibility and scientific …

… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … the process. If you have any questions, please contact your Project Manager or jgi-project[email protected] . … 1) … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get … the professor was actually quite enthusiastic about the project and he arranged funding to do it nonetheless from …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … And so when I came into graduate school, I worked on that project. And it was working exactly that same kind of way, …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … with isolate collections to complete large-scale sequencing projects, including 10,000 Actinomycetota strains and 10,000 … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … for the remainder of this policy) produced through all user projects accepted FY22 and later through the Community … for their planned work.   … For sequencing or metabolomics projects: data are subject to a  one-year embargo .  For …

The IMG group owns and maintains integral components of JGI’s production workflow, … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … Genomes (IMG) data management system … As part of this project, pairwise average nucleotide identities (ANI) and …