Search

… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, … humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create …

… Plants are complex organisms that harbor a fantastic … contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by … and computational genomics to better understand the plant-associated terrestrial world. Research Team    …

… The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's key …

… Nayfach S, et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509. Danko D. et al. (2021) A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . … Sberro H, et al. (2019) Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes. Cell …

… contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun … these projects. Assembly, annotation for ( Phytozome for plant, Phycocosm for algae) depends on genome Plant and Algal Resequencing SNP and short indel calls, …

… of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome … to gain insights into how small molecules function within plants, microbes, and ecosystems. Identifying and analyzing …

… in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often live in symbiosis with plants and might actually be producing molecules that are … Nature Biotechnology, titled ‘A genomic catalog of Earth’s microbiomes’ . (Citation: Nayfach S et al. A Genomic Catalog …

… generated from mining genomic data by designing and assembling physical DNA constructs that can then be …

… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … written a book about her life and her science, called The Plant Hunter , and I have to say it’s so awesome! For those … at the intersection of traditional medicines and medicinal plants with the pursuit of modern drug discovery. It’s also …

… of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements … activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential … Integrated Microbial Genomes and Microbiomes …

… sequence and assemble samples, such as those from soil and plants, our group researches the use and implementation of … boundaries and metabolic strategies across environmental microbiomes. mSystems0:e01744-24. … Roux, S., Seshadri, R. et al. A genomic catalog of Earth’s microbiomes. Nat Biotechnol 39 , 499–509 (2021). …

… and ultimately predict the main viral impacts in these microbiomes. … the range of virus-host interactions occurring in microbiomes, these omics data must be complemented with … Phage activity in microbiomes from multiomics …