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2025 NeLLi Symposium
Las Vegas, and the Desert Research Institute, the 2025 NeLLi Symposium delves into the most recent expansions of the Tree … Immediately following the NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving …
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DOE Metrics
…     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … 2,208 102% *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … target is based on 98% of the total available hours.   FY 2021 DOE Metrics There were 2,180 unique* JGI users in …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the … novel microbial lineages, leading to a new appreciation for the extent of diversity. The phylogenetic and functional …
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Microbiome Data Science Team
… analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … analysis of Big Data. The Research Team   … The research efforts of the group have concentrated in demonstrating the … bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the …
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User Support
… work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). All work performed at the JGI is initiated via the Work Initiation … must first log in (Note: new users of the JGI will need to register and create a login at https://signon.jgi.doe.gov ). …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot … Nigel Mouncey. I got him on to talk about JGI’s vision for secondary metabolism, his past in industry in developing … Non-model Bacteria Check out the agenda for the JGI’s 2021 Annual Genomics of Energy & Environment Meeting   …
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Products
… to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the call language … Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to …
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JGI on the 2021 Highly Cited Researchers List
Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen … Apply for a CSP Proposal. She also co-organized the NeLLi 2021 Symposium: From New Lineages of Life to New …
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and … e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Data Policy
Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … research data and analysis products (referred to as “data” for the remainder of this policy) produced through all user … for which JGI has not yet received samples as of Sep 30, 2021 are subject to a 2-year embargo to maintain the …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … of the day I’m due to release it, which is not ideal for me keeping myself on my self-imposed schedule. So, we’ll … by Inverse Stable Isotopic Labeling . ACS Chem Biol. 2021 Aug 20;16(8):1332-1338. doi: 10.1021/acschembio.1c00329. …
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VEGA Symposium
…  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was to bring together a “Viral EcoGenomics” … to all of our in-person and virtual attendees! Click here for the event photos. Keynote Speakers Katrine Whiteson , UC … (LBNL), Stephanie Servetas (NIST), Devaki Bhaya (Stanford), Gary Trubl (LLNL), Scott Jackson (NIST) …
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