Search

… The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, … data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … of data science in tackling grand challenges in Biology, with a special focus on microbiome research.  These efforts …

… candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential of … trait or phenotype of interest, prior to and in conjunction with whole genome sequencing. …

… encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. … insights into microbial diversity and metabolic potential, with implications for energy production, environmental … Program combines large-scale, time-series metagenomic data with detailed characterization of model systems to explore …

… I really do want you all to hear this great conversation with Aaron Puri. He is an Assistant Professor from the … at the University of Washington in Seattle . And she studies bacteria that grow on one-carbon compounds like methanol and methane. And I really dove into microbial physiology and …

… location at the IGB fosters team science and collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    … the Integrative Genomics Building (IGB), a home it shares with the staff of the DOE Systems Biology Knowledgebase …

… of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome … and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel metabolites, … of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial …

… of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team … our understanding of the impacts of these viruses on microbiome processes is still limited. One key challenge is to complement diversity surveys ( Who is there? ) with activity measurements ( Who is active when/where, and …

… expertise to support the global research community in studies of complex biological and environmental systems. We … and innovative materials production. Through collaboration with its users, the JGI provides genomic insights to improve … bioproducts. Critical Minerals and Materials (CMM): Genomic studies of microbial and plant metabolism reveal biological …

… As always, you’ll find transcripts and show notes with links to lots of other resources, especially for these … Nature Biotechnology, titled ‘A genomic catalog of Earth’s microbiomes’ . (Citation: Nayfach S et al. A Genomic Catalog … seen in the past with people that have done metagenomic studies on, say, the human gut or whatever. But other than …

… applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an accelerated timeline as compared with the standard CSP projects. In addition, they must … of funds. All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides …