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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … cells that are from candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The … the bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of … impacts of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group develop, … gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate … For further details, please reach out to the Group Lead …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal …
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User Support Analysis Group
… The User Support Analysis group provides computational analysis for new technology … We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and … workflows for new product types, to the development of automated analysis pipelines for standard sequencing …
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Metabolomics Technology Group
… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is … For further details, please reach out to the Group Lead …
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and … Plant microbiomes hold the amazing ability to influence plant development, fitness and …
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Publication Policy
… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … with a list of JGI staff who contributed to their project, using the CRediT taxonomy ( credit.niso.org/ , with …
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Synthesis
…   The Joint Genome Institute's DNA Synthesis Platform capabilities … cycling and bioproduct applications.  The team has three subgroups: Synthetic Biology Lab : a user science group … group and focused on new technologies and optimizing tools — including strain engineering — to make them more …
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Natural Prodcast Episode 9: Roger Linington
… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … which stands for International Cooperative Biodiversity Groups, and it’s this great program funded by the National … Yeah, so we do have an ongoing effort to try and capture reassignments, and many of those come from efforts with total …
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