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The IMG group owns and maintains integral components of JGI’s production workflow, … pairwise AF and ANI values, we were able to ascertain mis-assignment of species names in genomes spanning nearly 18% …

… the bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin … A., Woyke T ., Kyrpides N.C. & Rubin E.M. Stop codon reassignments in the wild. Science 344, 909-13 (2014). Rinke … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

Research in the Eloe-Fadrosh group focuses on using genome-resolved … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

Software engineers in the Synthetic Biology Informatics Group develop, … gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … jgi.doe.gov/portal/lookup?keyName=proposalId&keyValue=XXXXXX&groupOnly=1&app=Info where XXXXXX is the WIP proposal ID. …

The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … Publications … For further details, please reach out to the Group Lead …

… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

The User Support Analysis group provides computational analysis for new technology … We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and … workflows for new product types, to the development of automated analysis pipelines for standard sequencing …

Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our … Team    … For further details, please reach out to the Group Lead …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled experimental and computational approach, we … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

The Joint Genome Institute's DNA Synthesis Platform capabilities … cycling and bioproduct applications.  The team has three subgroups: Synthetic Biology Lab : a user science group … group and focused on new technologies and optimizing tools — including strain engineering — to make them more …