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… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We … heard me speak recently have heard me talk about the new data portal that we’re building. And I’ve been eager to …

… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …

Data produced and released by the US Department of Energy … Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific … and collaborators have the right to produce manuscripts for publication and the responsibility for leading the … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other …

To expand access to integrated data, improve tools and infrastructure as well as ensure … to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development of tools and infrastructure for microbiome data science, and the development of new …

…     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational …

… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … GenTegra RNA Preparation Procedure … 1) Complete Sample Metadata form Sample metadata is collected via spreadsheet or … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

… and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, … The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the Group Lead …

Chief Informatics Officer …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda … File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank …

… sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …