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Data produced and released by the US Department of Energy … Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …

To expand access to integrated data, improve tools and infrastructure as well as ensure … to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development of tools and infrastructure for microbiome data science, and the development of new …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific … and collaborators have the right to produce manuscripts for publication and the responsibility for leading the … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other …

… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …

… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … GenTegra RNA Preparation Procedure … 1) Complete Sample Metadata form Sample metadata is collected via spreadsheet or … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

Chief Informatics Officer …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda … File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank …

… sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …

… significantly lowering costs. Staff process samples, perform quality checks, and prep libraries for sequencing. They apply Lean Six Sigma practices to … and development approaches, testing various platforms to see what works best for applications. The team …

… of working with our facility. This includes help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s … of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …

… sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … from the JGI may  submit proposals here . Investigators preparing grant applications to DOE-BER and requesting an …