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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come … growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … two varieties: 95 percent of what is grown is known as Upland cotton ( Gossypium hirsutum ), while the remaining 5 …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … our second season of Natural Prodcast. This first episode up is another primer episode. These are episodes where … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … functions and interactions, the Microbial Program supports innovations in sustainable agriculture, carbon … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … it was a very exciting event. And people in the research group would pore over it and argue about it and think about it … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … computational tools and visualization resources that support user analysis of biogeochemically-relevant pathways, … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … more about. He works with methylotrophs, which are a group of carbon-fixing bacteria that I would say are are still … sole source of carbon and energy. And it was before group meeting and it was like a nice summer day in Seattle I …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … bolster agricultural resilience. The program’s discoveries support a plant based bioeconomy where plants are a major … on Phytozome … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … gene markers, and producing environmental genomes to support both basic research and applied science. By advancing …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … that do unusual or unprecedented chemistry. So it’s super fun to hear about what folks are up to in a slightly different niche in chemical enzymology. …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, … cell genomics, DNA synthesis, and metabolomics.   … Deputy of Genomic Technologies …
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