2018
(2018) The fungus that came in from the cold: dry rot's pre-adapted ability to invade buildings.
ISME J 12(3), 791-801.
10.1038/s41396-017-0006-8
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(2018) Enzymatic Adaptation of Podospora anserina to Different Plant Biomass Provides Leads to Optimized Commercial Enzyme Cocktails.
Biotechnol J , e1800185.
10.1002/biot.201800185
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(2018) Litter chemistry influences decomposition through activity of specific microbial functional guilds.
Ecological Monographs 88(3), 429-444.
10.1002/ecm.1303/full
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(2018) An analysis of codon bias in six red yeast species.
Yeast .
10.1002/yea.3359
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(2018) Genome-wide analysis of cytochrome P450s of Trichoderma spp.: annotation and evolutionary relationships.
Fungal Biol Biotechnol 5, 12.
10.1186/s40694-018-0056-3
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(2018) High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis.
New Phytol .
10.1111/nph.14989
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(2018) Functional genomics of lipid metabolism in the oleaginous yeast Rhodosporidium toruloides.
Elife 7.
10.7554/eLife.32110
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(2018) Dichomitus squalens partially tailors its molecular responses to the composition of solid wood.
Environ Microbiol .
10.1111/1462-2920.14416
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(2018) Secretome Analysis from the Ectomycorrhizal Ascomycete Cenococcum geophilum.
Front Microbiol 9, 141.
10.3389/fmicb.2018.00141
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(2018) Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts.
PLoS Genet 14(4), e1007322.
10.1371/journal.pgen.1007322
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(2018) Phylogenetic and Phylogenomic Definition of Rhizopus Species.
G3 (Bethesda) 8(6), 2007-2018.
10.1534/g3.118.200235
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(2018) Multi-omic analyses of extensively decayed Pinus contorta reveal expression of diverse array of lignocellulose degrading enzymes.
Appl Environ Microbiol .
10.1128/AEM.01133-18
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(2018) Broad genomic sampling reveals a smut pathogenic ancestry of the fungal clade Ustilaginomycotina.
Mol Biol Evol .
10.1093/molbev/msy072
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(2018) Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species.
Proc Natl Acad Sci U S A 115(4), E753-E761.
10.1073/pnas.1715954115
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(2018) Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi.
Sci Rep 8(1), 6321.
10.1038/s41598-018-24686-4
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(2018) Evolutionary instability of CUG-Leu in the genetic code of budding yeasts.
Nat Commun 9(1), 1887.
10.1038/s41467-018-04374-7
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(2018) Earth BioGenome Project: Sequencing life for the future of life.
Proc Natl Acad Sci U S A 115(17), 4325-4333.
10.1073/pnas.1720115115
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(2018) Russulaceae: a new genomic dataset to study ecosystem function and evolutionary diversification of ectomycorrhizal fungi with their tree associates.
New Phytol 218(1), 54-65.
10.1111/nph.15001
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(2018) Genome-Wide Analysis of Corynespora cassiicola Leaf Fall Disease Putative Effectors.
Front Microbiol 9, 276.
10.3389/fmicb.2018.00276
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(2018) Draft Genome Sequence of the Basidiomycete White-Rot Fungus Phlebia centrifuga.
Genome Announc 6(14).
10.1128/genomeA.01414-17
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(2018) Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists.
New Phytol 217(3), 1213-1229.
10.1111/nph.14974
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(2018) Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass.
Biotechnol Biofuels 11, 201.
10.1186/s13068-018-1198-5
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(2018) Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle.
Genome Announc 6(25).
10.1128/genomeA.00537-18
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(2018) Coniella lustricola, a new species from submerged detritus.
Mycological Progress 17(1-2), 191-203.
10.1007/s11557-017-1337-6
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(2018) Catabolic repression in early-diverging anaerobic fungi is partially mediated by natural antisense transcripts.
Fungal Genet Biol 121, 1-9.
10.1016/j.fgb.2018.09.004
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(2018) Talaromyces borbonicus, sp. nov., a novel fungus from biodegraded Arundo donax with potential abilities in lignocellulose conversion.
Mycologia 110(2), 316-324.
10.1080/00275514.2018.1456835
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(2018) Genome-reconstruction for eukaryotes from complex natural microbial communities.
Genome Res 28(4), 569-580.
10.1101/gr.228429.117
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(2018) Substrate-Specific Differential Gene Expression and RNA editing in the Brown Rot Fungus Fomitopsis pinicola.
Appl Environ Microbiol 84(16).
10.1128/AEM.00991-18
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2017
(2017) Phylogenetics and Phylogenomics of Rust Fungi.
Adv Genet 100, 267-307.
10.1016/bs.adgen.2017.09.011
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(2017) Population genomics of picophytoplankton unveils novel chromosome hypervariability.
Sci Adv 3(7), e1700239.
10.1126/sciadv.1700239
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(2017) Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales.
BMC Genomics 18(1), 883.
10.1186/s12864-017-4243-z
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(2017) Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments.
Biotechnol Biofuels 10, 35.
10.1186/s13068-017-0700-9
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(2017) Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.
Genome Biol 18(1), 28.
10.1186/s13059-017-1151-0
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(2017) The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation.
Environ Microbiol 19(3), 1338-1354.
10.1111/1462-2920.13670
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(2017) Fungal and plant gene expression in the Tulasnella calospora-Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas.
New Phytol 213(1), 365-379.
10.1111/nph.14279
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(2017) Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress.
PLoS Biol 15(12), e2004050.
10.1371/journal.pbio.2004050
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(2017) Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12.
Genom Data 14, 21-23.
10.1016/j.gdata.2017.08.003
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(2017) A parts list for fungal cellulosomes revealed by comparative genomics.
Nat Microbiol 2, 17087.
10.1038/nmicrobiol.2017.87
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(2017) A parts list for fungal cellulosomes revealed by comparative genomics.
Nat Microbiol 2, 17087.
10.1038/nmicrobiol.2017.87
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(2017) Draft Genome Sequence of Coniochaeta ligniaria NRRL 30616, a Lignocellulolytic Fungus for Bioabatement of Inhibitors in Plant Biomass Hydrolysates.
Genome Announc 5(4).
10.1128/genomeA.01476-16
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(2017) Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: a case study using the lichen-forming genus Peltigera section Polydactylon.
Mol Phylogenet Evol .
10.1016/j.ympev.2017.08.013
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(2017) Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen -forming genus Peltigera section Polydactylon.
Molecular Phylogenetics and Evolution 117, 10-29.
10.1016/j.ympev.2017.08.013
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(2017) FunGAP: Fungal Genome Annotation Pipeline Using Evidence-based Gene Model Evaluation.
Bioinformatics .
10.1093/bioinformatics/btx353
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(2017) FunGAP: Fungal Genome Annotation Pipeline Using Evidence-based Gene Model Evaluation.
Bioinformatics .
10.1093/bioinformatics/btx353
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(2017) Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.
Nature 541(7638), 536-540.
10.1038/nature20803
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(2017) Widespread adenine N6-methylation of active genes in fungi.
Nat Genet 49(6), 964-968.
10.1038/ng.3859
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(2017) Bacterial endosymbionts influence host sexuality and reveal reproductive genes of early divergent fungi.
Nat Commun 8(1), 1843.
10.1038/s41467-017-02052-8
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(2017) Bacterial endosymbionts influence host sexuality and reveal reproductive genes of early divergent fungi.
Nat Commun 8(1), 1843.
10.1038/s41467-017-02052-8
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(2017) Widespread adenine N6-methylation of active genes in fungi.
Nat Genet 49(6), 964-968.
10.1038/ng.3859
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(2017) Comparative Genomics of the Ectomycorrhizal Sister Species Rhizopogon vinicolor and Rhizopogon vesiculosus (Basidiomycota: Boletales) Reveals a Divergence of the Mating Type B Locus.
G3 (Bethesda) 7(6), 1775-1789.
10.1534/g3.117.039396
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(2017) Comparative Genomics of the Ectomycorrhizal Sister Species Rhizopogon vinicolor and Rhizopogon vesiculosus (Basidiomycota: Boletales) Reveals a Divergence of the Mating Type B Locus.
G3 (Bethesda) 7(6), 1775-1789.
10.1534/g3.117.039396
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(2017) Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution.
Mol Biol Evol 34(1), 35-44.
10.1093/molbev/msw238
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(2017) The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi.
J Biotechnol 246, 1-3.
10.1016/j.jbiotec.2017.02.012
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(2017) Comparative genomics and expression levels of hydrophobins from eight mycorrhizal genomes.
Mycorrhiza .
10.1007/s00572-016-0758-4
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(2017) The homothallic mating-type locus of the conifer needle endophyte Phialocephala scopiformis DAOMC 229536 (order Helotiales).
Fungal Biol 121(12), 1011-1024.
10.1016/j.funbio.2017.08.007
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(2017) The homothallic mating-type locus of the conifer needle endophyte Phialocephala scopiformis DAOMC 229536 (order Helotiales).
Fungal Biol 121(12), 1011-1024.
10.1016/j.funbio.2017.08.007
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(2017) The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. - Acephala appalanata species complex.
Fungal Biol 121(3), 212-221.
10.1016/j.funbio.2016.11.007
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(2017) Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria.
Nat Ecol Evol 1(12), 1931-1941.
10.1038/s41559-017-0347-8
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(2017) The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.
Microbiol Spectr 5(5).
10.1128/microbiolspec.FUNK-0053-2016
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(2017) The transcription factor PDR-1 is a multi-functional regulator and key component of pectin deconstruction and catabolism in Neurospora crassa.
Biotechnol Biofuels 10, 149.
10.1186/s13068-017-0807-z
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(2017) The transcription factor PDR-1 is a multi-functional regulator and key component of pectin deconstruction and catabolism in Neurospora crassa.
Biotechnol Biofuels 10, 149.
10.1186/s13068-017-0807-z
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(2017) Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens.
Environ Microbiol .
10.1111/1462-2920.13669
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(2017) Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels.
Appl Microbiol Biotechnol 101(6), 2603-2618.
10.1007/s00253-017-8091-1
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(2017) A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism.
PLoS Genet 13(5), e1006737.
10.1371/journal.pgen.1006737
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(2017) A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism.
PLoS Genet 13(5), e1006737.
10.1371/journal.pgen.1006737
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2016
(2016) Comparative and transcriptional analysis of the predicted secretome in the lignocellulose-degrading basidiomycete fungus Pleurotus ostreatus.
Environ Microbiol .
10.1111/1462-2920.13360
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(2016) Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control.
PLoS Genet 12(8), e1005876.
10.1371/journal.pgen.1005876
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(2016) Transposable Elements versus the Fungal Genome: Impact on Whole-Genome Architecture and Transcriptional Profiles.
PLoS Genet 12(6), e1006108.
10.1371/journal.pgen.1006108
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(2016) Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication.
Curr Biol .
10.1016/j.cub.2016.04.038
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(2016) Draft Genome Sequence of Microdochium bolleyi, a Dark Septate Fungal Endophyte of Beach Grass.
Genome Announc 4(2).
10.1128/genomeA.00270-16
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(2016) The genome of Xylona heveae provides a window into fungal endophytism.
Fungal Biol 120(1), 26-42.
10.1016/j.funbio.2015.10.002
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(2016) The mitochondrial genome of the ethanol-metabolizing, wine cellar mold Zasmidium cellare is the smallest for a filamentous ascomycete.
Fungal Biol 120(8), 961-74.
10.1016/j.funbio.2016.05.003
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(2016) Genetics of mating in members of the Chaetomiaceae as revealed by experimental and genomic characterization of reproduction in Myceliophthora heterothallica.
Fungal Genet Biol 86, 9-19.
10.1016/j.fgb.2015.11.007
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(2016) Lipid metabolic changes in an early divergent fungus govern the establishment of a mutualistic symbiosis with endobacteria.
Proc Natl Acad Sci U S A 113(52), 15102-15107.
10.1073/pnas.1615148113
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(2016) Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2.
Genome Announc 4(5).
10.1128/genomeA.00976-16
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(2016) Visual Comparative Omics of Fungi for Plant Biomass Deconstruction.
Front Microbiol 7, 1335.
10.3389/fmicb.2016.01335
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(2016) Ochratoxin A production by Penicillium thymicola.
Fungal Biol 120(8), 1041-9.
10.1016/j.funbio.2016.04.002
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(2016) Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.
Nat Commun 7, 12662.
10.1038/ncomms12662
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(2016) Comparative genomics of biotechnologically important yeasts.
Proc Natl Acad Sci U S A .
10.1073/pnas.1603941113
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(2016) Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes.
Science .
10.1126/science.aad1431
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(2016) Robust and effective methodologies for cryopreservation and DNA extraction from anaerobic gut fungi.
Anaerobe 38, 39-46.
10.1016/j.anaerobe.2015.11.008
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(2016) A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data.
Mycologia 108(5), 1028-1046.
10.3852/16-042
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(2016) A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data.
Mycologia 108(5), 1028-1046.
10.3852/16-042
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(2016) Full Genome of Phialocephala scopiformis DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin.
Genome Announc 4(1).
10.1128/genomeA.01768-15
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(2016) Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla.
PLoS One 11(7), e0155839.
10.1371/journal.pone.0155839
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(2016) Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi.
PLoS One 11(7), e0157844.
10.1371/journal.pone.0157844
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2015
(2015) Draft Genome Sequence of Neurospora crassa Strain FGSC 73.
Genome Announc 3(2).
10.1128/genomeA.00074-15
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(2015) Genetic isolation between two recently diverged populations of a symbiotic fungus.
Mol Ecol .
10.1111/mec.13132
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(2015) Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants.
Genome Biol Evol 7(6), 1590-601.
10.1093/gbe/evv090
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(2015) Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus.
Biotechnol Biofuels 8, 216.
10.1186/s13068-015-0407-8
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(2015) Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus.
Biotechnol Biofuels 8, 216.
10.1186/s13068-015-0407-8
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(2015) Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen.
Proc Natl Acad Sci U S A 112(11), 3451-6.
10.1073/pnas.1424293112
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(2015) Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis.
New Phytol .
10.1111/nph.13546
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(2015) Genome sequence of the plant growth promoting endophytic yeast Rhodotorula graminis WP1.
Front Microbiol 6, 978.
10.3389/fmicb.2015.00978
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(2015) Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii.
Fungal Genet Biol 76, 78-92.
10.1016/j.fgb.2015.02.002
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(2015) Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing.
PLoS One 10(7), e0132628.
10.1371/journal.pone.0132628
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(2015) Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists (vol 47, pg 410, 2015).
Nature Genetics 47(4), 410-415.
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(2015) Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists (vol 47, pg 410, 2015).
Nature Genetics 47(4), 410-415.
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(2015) Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems.
MBio 6(4).
10.1128/mBio.00918-15
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(2015) Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype.
BMC Genomics 16, 326.
10.1186/s12864-015-1526-0
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(2015) Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation.
J Biotechnol 211, 42-43.
10.1016/j.jbiotec.2015.06.426
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(2015) Strand-Specific RNA-Seq Analyses of Fruiting Body Development in Coprinopsis cinerea.
PLoS One 10(10), e0141586.
10.1371/journal.pone.0141586
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(2015) Comparative genomics of early-diverging mushroom-forming fungi provides insights into the origins of lignocellulose decay capabilities.
Mol Biol Evol .
10.1093/molbev/msv337
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(2015) Identification of a Novel Nematotoxic Protein by Challenging the Model Mushroom Coprinopsis cinerea with a Fungivorous Nematode.
G3 (Bethesda) 6(1), 87-98.
10.1534/g3.115.023069
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(2015) The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
Mol Plant Microbe Interact 28(3), 261-73.
10.1094/MPMI-05-14-0129-FI
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(2015) Degradation of Bunker C Fuel Oil by White-Rot Fungi in Sawdust Cultures Suggests Potential Applications in Bioremediation.
PLoS One 10(6), e0130381.
10.1371/journal.pone.0130381
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2014
(2014) Horizontal transfer of carbohydrate metabolism genes into ectomycorrhizal Amanita.
New Phytol .
10.1111/nph.13140
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(2014) Transcriptional responses of the Bdtf1-deletion mutant to the phytoalexin brassinin in the necrotrophic fungus Alternaria brassicicola.
Molecules 19(8), 10717-32.
10.3390/molecules190810717
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(2014) Identification and characterization of the polyketide synthase involved in ochratoxin A biosynthesis in Aspergillus carbonarius.
Int J Food Microbiol 179, 10-7.
10.1016/j.ijfoodmicro.2014.03.013
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(2014) Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species.
BMC Genomics 15, 549.
10.1186/1471-2164-15-549
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(2014) MycoCosm portal: gearing up for 1000 fungal genomes.
Nucleic Acids Res 42(Database issue), D699-704.
10.1093/nar/gkt1183
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(2014) Transposable Element Dynamics among Asymbiotic and Ectomycorrhizal Amanita Fungi.
Genome Biol Evol 6(7), 1564-78.
10.1093/gbe/evu121
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(2014) Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood.
PLoS Genet 10(12), e1004759.
10.1371/journal.pgen.1004759
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(2014) Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood.
PLoS Genet 10(12), e1004759.
10.1371/journal.pgen.1004759
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(2014) Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential.
Proc Natl Acad Sci U S A 111(48), 16995-7002.
10.1073/pnas.1418963111
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(2014) Genomic adaptations of the halophilic Dead Sea filamentous fungus Eurotium rubrum.
Nat Commun 5, 3745.
10.1038/ncomms4745
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(2014) Expanding genomics of mycorrhizal symbiosis.
Front Microbiol 5, 582.
10.3389/fmicb.2014.00582
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(2014) Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts.
Nat Commun 5, 4471.
10.1038/ncomms5471
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(2014) The genome portal of the Department of Energy Joint Genome Institute: 2014 updates.
Nucleic Acids Res 42(Database issue), D26-31.
10.1093/nar/gkt1069
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(2014) Genomics of wood-degrading fungi.
Fungal Genet Biol .
10.1016/j.fgb.2014.05.001
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(2014) The phytoalexin camalexin induces fundamental changes in the proteome of Alternaria brassicicola different from those caused by brassinin.
Fungal Biol 118(1), 83-93.
10.1016/j.funbio.2013.11.005
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(2014) Duplications and losses in gene families of rust pathogens highlight putative effectors.
Front Plant Sci 5, 299.
10.3389/fpls.2014.00299
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(2014) The mutualist Laccaria bicolor expresses a core gene regulon during the colonization of diverse host plants and a variable regulon to counteract host-specific defenses.
Mol Plant Microbe Interact .
10.1094/MPMI-05-14-0129-FI
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(2014) Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi.
Proc Natl Acad Sci U S A 111(27), 9923-8.
10.1073/pnas.1400592111
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(2014) Harnessing genetic diversity in Saccharomyces cerevisiae for fermentation of xylose in hydrolysates of alkaline hydrogen peroxide-pretreated biomass.
Appl Environ Microbiol 80(2), 540-54.
10.1128/AEM.01885-13
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(2014) Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951.
Genome Announc 2(3).
10.1128/genomeA.00539-14
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(2014) Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogen Mixia osmundae.
New Phytol 202(2), 554-64.
10.1111/nph.12653
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(2014) Comparative Genomics of Saccharomyces cerevisiae Natural Isolates for Bioenergy Production.
Genome Biol Evol 6(9), 2557-66.
10.1093/gbe/evu199
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2013
(2013) Fungal genomes mining to discover novel sterol esterases and lipases as catalysts.
BMC Genomics 14, 712.
10.1186/1471-2164-14-712
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(2013) Phylogenetic and Phylogenomic overview of the Polyporales.
Mycologia .
10.3852/13-003
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(2013) Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives.
Genome Announc 1(3).
10.1128/genomeA.00323-13
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(2013) Fungal-specific transcription factor AbPf2 activates pathogenicity in Alternaria brassicicola.
Plant J 75(3), 498-514.
10.1111/tpj.12217
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(2013) Comparative genome structure, secondary metabolite, and effector coding capacity across Cochliobolus pathogens.
PLoS Genet 9(1), e1003233.
10.1371/journal.pgen.1003233
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(2013) The central role of selenium in the biochemistry and ecology of the harmful pelagophyte, Aureococcus anophagefferens.
ISME J 7(7), 1333-43.
10.1038/ismej.2013.25
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(2013) Comparative Genomics Analysis of Trichoderma reesei Strains .
Industrial Biotechnology 9(6), 352-367.
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(2013) Pan genome of the phytoplankton Emiliania underpins its global distribution.
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(2012) The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes.
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(2012) The genome portal of the Department of Energy Joint Genome Institute.
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(2012) Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche.
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(2012) The genome of the xerotolerant mold Wallemia sebi reveals adaptations to osmotic stress and suggests cryptic sexual reproduction.
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(2012) The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties.
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(2011) Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma.
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(2011) Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics.
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(2007) Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis.
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