2020
(2020) Constructing a yeast to express the largest cellulosome complex on the cell surface.
Proc Natl Acad Sci U S A 117(5), 2385-2394.
10.1073/pnas.1916529117
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(2020) Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulator.
Microbiol Res 234, 126426.
10.1016/j.micres.2020.126426
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(2020) Genome Sequence of the Chestnut Blight Fungus Cryphonectria parasitica EP155: A Fundamental Resource for an Archetypical Invasive Plant Pathogen.
Phytopathology , PHYTO12190478A.
10.1094/PHYTO-12-19-0478-A
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(2020) Narnaviruses: novel players in fungal-bacterial symbioses.
ISME J .
10.1038/s41396-020-0638-y
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(2020) The architecture of metabolism maximizes biosynthetic diversity in the largest class of fungi.
Mol Biol Evol .
10.1093/molbev/msaa122
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(2020) 101 Dothideomycetes genomes: A test case for predicting lifestyles and emergence of pathogens.
Stud Mycol 96, 141-153.
10.1016/j.simyco.2020.01.003
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(2020) A comparative genomics study of 23 Aspergillus species from section Flavi.
Nat Commun 11(1), 1106.
10.1038/s41467-019-14051-y
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(2020) Conserved white rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus.
DNA Res .
10.1093/dnares/dsaa011
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(2020) Synthetic hybrids of six yeast species.
Nat Commun 11(1), 2085.
10.1038/s41467-020-15559-4
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(2020) Model Choice, Missing Data, and Taxon Sampling Impact Phylogenomic Inference of Deep Basidiomycota Relationships.
Syst Biol 69(1), 17-37.
10.1093/sysbio/syz029
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(2020) Succession of physiological stages hallmarks the transcriptomic response of the fungus Aspergillus niger to lignocellulose.
Biotechnol Biofuels 13, 69.
10.1186/s13068-020-01702-2
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(2020) Draft Genome Assemblies of Ionic Liquid-Resistant Yarrowia lipolytica PO1f and Its Superior Evolved Strain, YlCW001.
Microbiol Resour Announc 9(9).
10.1128/MRA.01356-19
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(2020) The regulatory and transcriptional landscape associated with carbon utilization in a filamentous fungus.
Proc Natl Acad Sci U S A 117(11), 6003-6013.
10.1073/pnas.1915611117
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2019
(2019) Comparative genomics reveals unique wood-decay strategies and fruiting body development in the Schizophyllaceae.
New Phytol .
10.1111/nph.16032
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(2019) Comparative genomics reveals unique wood-decay strategies and fruiting body development in the Schizophyllaceae.
New Phytol .
10.1111/nph.16032
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(2019) Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants.
BMC Biol 17(1), 88.
10.1186/s12915-019-0702-0
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(2019) Broad-specificity GH131 beta-glucanases are a hallmark of Fungi and Oomycetes that colonise plants.
Environ Microbiol .
10.1111/1462-2920.14596
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(2019) Fungal ecological strategies reflected in gene transcription - a case study of two litter decomposers.
Environ Microbiol .
10.1111/1462-2920.14873
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(2019) An ectomycorrhizal fungus alters sensitivity to jasmonate, salicylate, gibberellin, and ethylene in host roots.
Plant Cell Environ .
10.1111/pce.13702
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(2019) Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass.
Biotechnol Biofuels 12, 81.
10.1186/s13068-019-1422-y
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(2019) Enzymatic Adaptation of Podospora anserina to Different Plant Biomass Provides Leads to Optimized Commercial Enzyme Cocktails.
Biotechnol J 14(4), e1800185.
10.1002/biot.201800185
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(2019) Draft Genome Sequence of the Ectomycorrhizal Ascomycete Sphaerosporella brunnea.
Microbiol Resour Announc 8(50).
10.1128/MRA.00857-19
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(2019) Diversity of cytosine methylation across the fungal tree of life.
Nat Ecol Evol 3(3), 479-490.
10.1038/s41559-019-0810-9
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(2019) Draft Genome Sequences of Three Monokaryotic Isolates of the White-Rot Basidiomycete Fungus Dichomitus squalens.
Microbiol Resour Announc 8(18).
10.1128/MRA.00264-19
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(2019) Glucose-mediated repression of plant biomass utilization in the white-rot fungus Dichomitus squalens.
Appl Environ Microbiol .
10.1128/AEM.01828-19
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(2019) Mixtures of aromatic compounds induce ligninolytic gene expression in the wood-rotting fungus Dichomitus squalens.
J Biotechnol .
10.1016/j.jbiotec.2019.11.014
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(2019) Genome-scale phylogenetics reveals a monophyletic Zoopagales (Zoopagomycota, Fungi).
Mol Phylogenet Evol 133, 152-163.
10.1016/j.ympev.2019.01.006
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(2019) Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases.
J Biol Chem .
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(2019) Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases.
J Biol Chem 294(45), 17117-17130.
10.1074/jbc.RA119.009223
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(2019) Phyllosticta citricarpa and sister species of global importance to Citrus.
Mol Plant Pathol 20(12), 1619-1635.
10.1111/mpp.12861
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(2019) Defining the eco-enzymological role of the fungal strain Coniochaeta sp. 2T2.1 in a tripartite lignocellulolytic microbial consortium.
FEMS Microbiol Ecol .
10.1093/femsec/fiz186
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(2019) Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network.
BMC Genomics 20(1), 853.
10.1186/s12864-019-6235-7
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(2019) Transcriptomic atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi.
Proc Natl Acad Sci U S A .
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(2019) Evolution and comparative genomics of the most common Trichoderma species.
BMC Genomics 20(1), 485.
10.1186/s12864-019-5680-7
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(2019) Genomic characterization of carbapenem-resistant Shewanella algae isolated from Asian hard clam (Meretrix lusoria).
Aquaculture 500, 300-304.
10.1016/j.aquaculture.2018.10.028
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(2019) Fungal Endophytes of Populus trichocarpa Alter Host Phenotype, Gene Expression, and Rhizobiome Composition.
Mol Plant Microbe Interact 32(7), 853-864.
10.1094/MPMI-05-18-0133-R
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(2019) Comparative Genomics and Transcriptomics to Analyze Fruiting Body Development in Filamentous Ascomycetes.
Genetics .
10.1534/genetics.119.302749
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(2019) Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina.
New Phytol .
10.1111/nph.15687
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(2019) Early Diverging Fungus Mucor circinelloides Lacks Centromeric Histone CENP-A and Displays a Mosaic of Point and Regional Centromeres.
Curr Biol 29(22), 3791-3802 e6.
10.1016/j.cub.2019.09.024
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(2019) Mitovirus and Mitochondrial Coding Sequences from Basal Fungus Entomophthora muscae.
Viruses 11(4).
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(2019) Tracking of enzymatic biomass deconstruction by fungal secretomes highlights markers of lignocellulose recalcitrance.
Biotechnol Biofuels 12, 76.
10.1186/s13068-019-1417-8
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(2019) Inorganic nitrogen availability alters Eucalyptus grandis receptivity to the ectomycorrhizal fungus Pisolithus albus but not symbiotic nitrogen transfer.
New Phytol .
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(2019) Diverse members of the Xylariales lack canonical mating-type regions.
Fungal Genet Biol 122, 47-52.
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(2019) Megaphylogeny resolves global patterns of mushroom evolution.
Nat Ecol Evol .
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(2019) Evolution of substrate-specific gene expression and RNA editing in brown rot wood-decaying fungi.
ISME J .
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2018
(2018) The gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi.
Studies in mycology 91, 61-78.
10.1016/j.simyco.2018.10.001
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(2018) Leveraging single-cell genomics to expand the fungal tree of life.
Nat Microbiol .
10.1038/s41564-018-0261-0
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(2018) Early Diverging Insect-Pathogenic Fungi of the Order Entomophthorales Possess Diverse and Unique Subtilisin-Like Serine Proteases.
G3 (Bethesda) 8(10), 3311-3319.
10.1534/g3.118.200656
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(2018) The fungus that came in from the cold: dry rot's pre-adapted ability to invade buildings.
ISME J 12(3), 791-801.
10.1038/s41396-017-0006-8
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(2018) Enzymatic Adaptation of Podospora anserina to Different Plant Biomass Provides Leads to Optimized Commercial Enzyme Cocktails.
Biotechnol J , e1800185.
10.1002/biot.201800185
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(2018) Litter chemistry influences decomposition through activity of specific microbial functional guilds.
Ecological Monographs 88(3), 429-444.
10.1002/ecm.1303/full
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(2018) An analysis of codon bias in six red yeast species.
Yeast .
10.1002/yea.3359
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(2018) Genome-wide analysis of cytochrome P450s of Trichoderma spp.: annotation and evolutionary relationships.
Fungal Biol Biotechnol 5, 12.
10.1186/s40694-018-0056-3
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(2018) High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis.
New Phytol .
10.1111/nph.14989
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(2018) Functional genomics of lipid metabolism in the oleaginous yeast Rhodosporidium toruloides.
Elife 7.
10.7554/eLife.32110
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(2018) Dichomitus squalens partially tailors its molecular responses to the composition of solid wood.
Environ Microbiol .
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(2018) Dichomitus squalens partially tailors its molecular responses to the composition of solid wood.
Environ Microbiol 20(11), 4141-4156.
10.1111/1462-2920.14416
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(2018) Secretome Analysis from the Ectomycorrhizal Ascomycete Cenococcum geophilum.
Front Microbiol 9, 141.
10.3389/fmicb.2018.00141
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(2018) Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts.
PLoS Genet 14(4), e1007322.
10.1371/journal.pgen.1007322
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(2018) Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance.
Studies in mycology 91, 23-36.
10.1016/j.simyco.2018.10.003
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(2018) The obligate alkalophilic soda-lake fungus Sodiomyces alkalinus has shifted to a protein diet.
Mol Ecol .
10.1111/mec.14912
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(2018) Phylogenetic and Phylogenomic Definition of Rhizopus Species.
G3 (Bethesda) 8(6), 2007-2018.
10.1534/g3.118.200235
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(2018) Multi-omic analyses of extensively decayed Pinus contorta reveal expression of diverse array of lignocellulose degrading enzymes.
Appl Environ Microbiol .
10.1128/AEM.01133-18
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(2018) Multi-omic Analyses of Extensively Decayed Pinus contorta Reveal Expression of a Diverse Array of Lignocellulose-Degrading Enzymes.
Applied and Environmental Microbiology 84(20), 14.
10.1128/aem.01133-18
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(2018) Broad genomic sampling reveals a smut pathogenic ancestry of the fungal clade Ustilaginomycotina.
Mol Biol Evol .
10.1093/molbev/msy072
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(2018) Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species.
Proc Natl Acad Sci U S A 115(4), E753-E761.
10.1073/pnas.1715954115
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(2018) Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi.
Sci Rep 8(1), 6321.
10.1038/s41598-018-24686-4
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(2018) Evolutionary instability of CUG-Leu in the genetic code of budding yeasts.
Nat Commun 9(1), 1887.
10.1038/s41467-018-04374-7
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(2018) Earth BioGenome Project: Sequencing life for the future of life.
Proc Natl Acad Sci U S A 115(17), 4325-4333.
10.1073/pnas.1720115115
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(2018) Russulaceae: a new genomic dataset to study ecosystem function and evolutionary diversification of ectomycorrhizal fungi with their tree associates.
New Phytol 218(1), 54-65.
10.1111/nph.15001
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(2018) Genome-Wide Analysis of Corynespora cassiicola Leaf Fall Disease Putative Effectors.
Front Microbiol 9, 276.
10.3389/fmicb.2018.00276
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(2018) Draft Genome Sequence of the Basidiomycete White-Rot Fungus Phlebia centrifuga.
Genome Announc 6(14).
10.1128/genomeA.01414-17
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(2018) Genomic and exoproteomic diversity in plant biomass degradation approaches among Aspergilli.
Studies in mycology 91, 79-99.
10.1016/j.simyco.2018.09.001
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(2018) Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists.
New Phytol 217(3), 1213-1229.
10.1111/nph.14974
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(2018) Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass.
Biotechnol Biofuels 11, 201.
10.1186/s13068-018-1198-5
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(2018) Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle.
Genome Announc 6(25).
10.1128/genomeA.00537-18
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(2018) Coniella lustricola, a new species from submerged detritus.
Mycological Progress 17(1-2), 191-203.
10.1007/s11557-017-1337-6
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(2018) Catabolic repression in early-diverging anaerobic fungi is partially mediated by natural antisense transcripts.
Fungal Genet Biol 121, 1-9.
10.1016/j.fgb.2018.09.004
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(2018) Catabolic repression in early-diverging anaerobic fungi is partially mediated by natural antisense transcripts.
Fungal Genetics and Biology 121, 1-9.
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(2018) Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication.
Scientific Reports 8, 12.
10.1038/s41598-018-36561-3
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(2018) Genomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales).
Frontiers in Microbiology 9(3058), 21.
10.3389/fmicb.2018.03058
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(2018) Talaromyces borbonicus, sp. nov., a novel fungus from biodegraded Arundo donax with potential abilities in lignocellulose conversion.
Mycologia 110(2), 316-324.
10.1080/00275514.2018.1456835
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(2018) Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri.
Nat Genet .
10.1038/s41588-018-0246-1
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(2018) Genetic dissection of interspecific differences in yeast thermotolerance.
Nat Genet 50(11), 1501-1504.
10.1038/s41588-018-0243-4
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(2018) Genome-reconstruction for eukaryotes from complex natural microbial communities.
Genome Res 28(4), 569-580.
10.1101/gr.228429.117
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(2018) Substrate-Specific Differential Gene Expression and RNA editing in the Brown Rot Fungus Fomitopsis pinicola.
Appl Environ Microbiol 84(16).
10.1128/AEM.00991-18
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(2018) Genomics and Development of Lentinus tigrinus: A White-Rot Wood-Decaying Mushroom with Dimorphic Fruiting Bodies.
Genome Biol Evol 10(12), 3250-3261.
10.1093/gbe/evy246
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2017
(2017) Phylogenetics and Phylogenomics of Rust Fungi.
Adv Genet 100, 267-307.
10.1016/bs.adgen.2017.09.011
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(2017) Population genomics of picophytoplankton unveils novel chromosome hypervariability.
Sci Adv 3(7), e1700239.
10.1126/sciadv.1700239
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(2017) Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales.
BMC Genomics 18(1), 883.
10.1186/s12864-017-4243-z
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(2017) Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments.
Biotechnol Biofuels 10, 35.
10.1186/s13068-017-0700-9
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(2017) Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.
Genome Biol 18(1), 28.
10.1186/s13059-017-1151-0
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(2017) The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation.
Environ Microbiol 19(3), 1338-1354.
10.1111/1462-2920.13670
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(2017) Fungal and plant gene expression in the Tulasnella calospora-Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas.
New Phytol 213(1), 365-379.
10.1111/nph.14279
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(2017) Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress.
PLoS Biol 15(12), e2004050.
10.1371/journal.pbio.2004050
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(2017) Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12.
Genom Data 14, 21-23.
10.1016/j.gdata.2017.08.003
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(2017) A parts list for fungal cellulosomes revealed by comparative genomics.
Nat Microbiol 2, 17087.
10.1038/nmicrobiol.2017.87
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(2017) A parts list for fungal cellulosomes revealed by comparative genomics.
Nat Microbiol 2, 17087.
10.1038/nmicrobiol.2017.87
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(2017) Draft Genome Sequence of Coniochaeta ligniaria NRRL 30616, a Lignocellulolytic Fungus for Bioabatement of Inhibitors in Plant Biomass Hydrolysates.
Genome Announc 5(4).
10.1128/genomeA.01476-16
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(2017) Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: a case study using the lichen-forming genus Peltigera section Polydactylon.
Mol Phylogenet Evol .
10.1016/j.ympev.2017.08.013
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(2017) Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen -forming genus Peltigera section Polydactylon.
Molecular Phylogenetics and Evolution 117, 10-29.
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(2017) FunGAP: Fungal Genome Annotation Pipeline Using Evidence-based Gene Model Evaluation.
Bioinformatics .
10.1093/bioinformatics/btx353
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(2017) FunGAP: Fungal Genome Annotation Pipeline Using Evidence-based Gene Model Evaluation.
Bioinformatics .
10.1093/bioinformatics/btx353
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(2017) Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.
Nature 541(7638), 536-540.
10.1038/nature20803
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(2017) Widespread adenine N6-methylation of active genes in fungi.
Nat Genet 49(6), 964-968.
10.1038/ng.3859
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(2017) Bacterial endosymbionts influence host sexuality and reveal reproductive genes of early divergent fungi.
Nat Commun 8(1), 1843.
10.1038/s41467-017-02052-8
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(2017) Bacterial endosymbionts influence host sexuality and reveal reproductive genes of early divergent fungi.
Nat Commun 8(1), 1843.
10.1038/s41467-017-02052-8
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(2017) Widespread adenine N6-methylation of active genes in fungi.
Nat Genet 49(6), 964-968.
10.1038/ng.3859
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(2017) Comparative Genomics of the Ectomycorrhizal Sister Species Rhizopogon vinicolor and Rhizopogon vesiculosus (Basidiomycota: Boletales) Reveals a Divergence of the Mating Type B Locus.
G3 (Bethesda) 7(6), 1775-1789.
10.1534/g3.117.039396
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(2017) Comparative Genomics of the Ectomycorrhizal Sister Species Rhizopogon vinicolor and Rhizopogon vesiculosus (Basidiomycota: Boletales) Reveals a Divergence of the Mating Type B Locus.
G3 (Bethesda) 7(6), 1775-1789.
10.1534/g3.117.039396
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(2017) Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution.
Mol Biol Evol 34(1), 35-44.
10.1093/molbev/msw238
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(2017) The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi.
J Biotechnol 246, 1-3.
10.1016/j.jbiotec.2017.02.012
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(2017) Comparative genomics and expression levels of hydrophobins from eight mycorrhizal genomes.
Mycorrhiza .
10.1007/s00572-016-0758-4
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(2017) The homothallic mating-type locus of the conifer needle endophyte Phialocephala scopiformis DAOMC 229536 (order Helotiales).
Fungal Biol 121(12), 1011-1024.
10.1016/j.funbio.2017.08.007
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(2017) The homothallic mating-type locus of the conifer needle endophyte Phialocephala scopiformis DAOMC 229536 (order Helotiales).
Fungal Biol 121(12), 1011-1024.
10.1016/j.funbio.2017.08.007
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(2017) The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. - Acephala appalanata species complex.
Fungal Biol 121(3), 212-221.
10.1016/j.funbio.2016.11.007
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(2017) Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria.
Nat Ecol Evol 1(12), 1931-1941.
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(2017) The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.
Microbiol Spectr 5(5).
10.1128/microbiolspec.FUNK-0053-2016
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(2017) The transcription factor PDR-1 is a multi-functional regulator and key component of pectin deconstruction and catabolism in Neurospora crassa.
Biotechnol Biofuels 10, 149.
10.1186/s13068-017-0807-z
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(2017) The transcription factor PDR-1 is a multi-functional regulator and key component of pectin deconstruction and catabolism in Neurospora crassa.
Biotechnol Biofuels 10, 149.
10.1186/s13068-017-0807-z
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(2017) Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens.
Environ Microbiol .
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(2017) Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels.
Appl Microbiol Biotechnol 101(6), 2603-2618.
10.1007/s00253-017-8091-1
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(2017) A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism.
PLoS Genet 13(5), e1006737.
10.1371/journal.pgen.1006737
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(2017) A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism.
PLoS Genet 13(5), e1006737.
10.1371/journal.pgen.1006737
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2016
(2016) Comparative and transcriptional analysis of the predicted secretome in the lignocellulose-degrading basidiomycete fungus Pleurotus ostreatus.
Environ Microbiol .
10.1111/1462-2920.13360
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(2016) Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control.
PLoS Genet 12(8), e1005876.
10.1371/journal.pgen.1005876
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(2016) Transposable Elements versus the Fungal Genome: Impact on Whole-Genome Architecture and Transcriptional Profiles.
PLoS Genet 12(6), e1006108.
10.1371/journal.pgen.1006108
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(2016) Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication.
Curr Biol .
10.1016/j.cub.2016.04.038
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(2016) Draft Genome Sequence of Microdochium bolleyi, a Dark Septate Fungal Endophyte of Beach Grass.
Genome Announc 4(2).
10.1128/genomeA.00270-16
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(2016) The genome of Xylona heveae provides a window into fungal endophytism.
Fungal Biol 120(1), 26-42.
10.1016/j.funbio.2015.10.002
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(2016) The mitochondrial genome of the ethanol-metabolizing, wine cellar mold Zasmidium cellare is the smallest for a filamentous ascomycete.
Fungal Biol 120(8), 961-74.
10.1016/j.funbio.2016.05.003
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(2016) Genetics of mating in members of the Chaetomiaceae as revealed by experimental and genomic characterization of reproduction in Myceliophthora heterothallica.
Fungal Genet Biol 86, 9-19.
10.1016/j.fgb.2015.11.007
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(2016) Lipid metabolic changes in an early divergent fungus govern the establishment of a mutualistic symbiosis with endobacteria.
Proc Natl Acad Sci U S A 113(52), 15102-15107.
10.1073/pnas.1615148113
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(2016) Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2.
Genome Announc 4(5).
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(2016) Full Genome of Phialocephala scopiformis DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin.
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(2016) Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla.
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(2015) Draft Genome Sequence of Neurospora crassa Strain FGSC 73.
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(2008) Intraspecific comparison and annotation of two complete mitochondrial genome sequences from the plant pathogenic fungus Mycosphaerella graminicola.
Fungal Genet Biol 45(5), 628-37.
10.1016/j.fgb.2007.12.005
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2007
(2007) Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis.
Nat Biotechnol 25(3), 319-26.
10.1038/nbt1290
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(2007) Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
Nature Methods 4(6), 495-500.
Doi 10.1038/Nmeth1043
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(2007) The Chlamydomonas genome reveals the evolution of key animal and plant functions.
Science 318(5848), 245-251.
Doi 10.1126/Science.1143609
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(2007) The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation.
Proceedings of the National Academy of Sciences of the United States of America 104(18), 7705-7710.
Doi 10.1073/Pnas.0611046104
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(2007) Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.
Science 317(5834), 86-94.
10.1126/science.1139158
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2006
(2006) Aspergillus niger genomics: Past, present and into the future.
Medical Mycology 44, S17-S21.
Doi 10.1080/13693780600921037
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(2006) Comparative genomics of the lactic acid bacteria.
Proc Natl Acad Sci U S A 103(42), 15611-6.
10.1073/pnas.0607117103
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(2006) The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Science 313(5793), 1596-1604.
Doi 10.1126/Science.1128691
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(2006) Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis.
Science 313(5791), 1261-1266.
Doi 10.1126/Science.1128796
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(2006) Computational analysis of the Phanerochaete chrysosporium v2.0 genome database and mass spectrometry identification of peptides in ligninolytic cultures reveal complex mixtures of secreted proteins.
Fungal Genetics and Biology 43(5), 343-356.
Doi 10.1016/J.Fgb.2006.01.003
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2004
(2004) The sequence and analysis of duplication-rich human chromosome 16.
Nature 432(7020), 988-94.
10.1038/nature03187
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(2004) Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78.
Nature Biotechnology 22(6), 695-700.
10.1038/nbt967
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(2004) The DNA sequence and comparative analysis of human chromosome 5.
Nature 431(7006), 268-74.
10.1038/nature02919
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