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Natural Prodcast Episode 10: A Primer on Genome Mining
… in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed … of Earth’s Microbiomes. Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) The GEM catalog expands … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …
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CSP New Investigator Call
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New Lineages of Life Group
… interactions through global metagenomics. Nature. 578 (7795), 432-436 Schulz et al. (2020) Advantages and limits of … diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Schulz et al. (2017) Towards a balanced view of …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re trying to do …
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Complete genome sequence of Xylanimonas cellulosilytica type strain (XIL07T)
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I … never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … looking at emails and I just saw this pop up. And saw a C&E News job little box and I thought, wow, this would be …
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Natural Prodcast Episode 7: Ben Shen
… because they’re so reactive. BEN: …going back to the 1950s. But the structure of which was not known until the … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain … of microbial origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the 40,000 from …
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Natural Prodcast Episode 6: Marc Chevrette
… by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … the United States in … I forget the number, but it’s over 42, 43 states, but we’re also in many countries, including … that’s really popped up at funding agencies and the popular news recently because a lot of soldiers in the Iraq and …
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Natural Prodcast Episode 17: Cassandra Quave
… she has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend … wasn’t an MRSA strain at the time because that was in the 1980s. I’m showing my age now. So early 1980s we didn’t have– … plants and bringing them back is not your jam, the good news is there’s this amazing resource that can be provided …
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Natural Prodcast Episode 12: Nadine Ziemert
Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … NADINE ZIEMERT: It wasn’t that long ago, but maybe 2006, 2007, or something like that. And we actually found the whole …
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A Plant Root Atlas for Tracking Developmental Trajectories
… by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially called out as … type and cell identity mutants . Dev Cell. 2022 Feb 28. S1534-5807(22)00033-8.doi: 10.1016/j.devcel.2022.01.008 Relevant … Single-Cell Data Viewer Tool on Phytozome Biosciences News:  Plant Single-Cell Solutions for Energy and the …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… relative of SOD is P. infestans , responsible for the mid-19th century Irish potato famine.   Shortly before the … and mechanisms of pathogenesis . Science. 2006 Sep 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes highlight …
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