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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … environmental challenges, such as improving soil health, carbon sequestration and bioeconomy applications. The … The Microbial Program focuses on using advanced sequencing …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … challenge our understanding of viral complexity and evolution Our research focuses on discovering and characterizing …
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Fungal & Algal Program
… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This research … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …
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Metabolomics Program
… metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical processes, …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses …
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Natural Prodcast Episode 7: Ben Shen
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode … compounds, Alison. They are – if you can imagine – two carbons in a triple bond attached to two carbons in a double … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … our understanding of the impacts of these viruses on microbiome processes is still limited. One key challenge …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and … development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working …
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … whereby they can modulate host metabolism, gene expression and phenotype. We have recently identified resident …
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