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… strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying … the largest publicly available collection of Uncultivated Viral Genomes, derived from genomes, metagenomes, and …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote genomes and mobile …

… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … Sai Prahabkar (UC Merced Intern) … Plant / Bacteria / Viral Interactions … Single-cell characterization of plant/environmental responses … Selected Publications … Research Team Alumni … …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass …

… focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of …

… and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research …

… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … to predict or just understand better the language of microbial cell-cell communication. And he told us about his … It’s anthropomorphizing a little bit here, but it allows us to think about what the quote unquote “purpose” is …

… as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial … reference transcriptome), DGE, alignment files 134/134 Viral Minimal Draft Draft quality viral assembly, many …

See below for examples of successful Letters of Intent to our … genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though …

… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I … we didn’t even sequence the whole genome. We just did a low-resolution shotgun pass where we sequenced 500 runs. And … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme …