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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … environmental challenges, such as improving soil health, carbon sequestration and bioeconomy applications. The … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in …
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Metagenome Program
… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the Program aims to …
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Environmental Genomics Group
… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The Environmental …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… be hearing about microbiology and natural products from the Great Salt Lake, and you’re going to learn, like me, what a … hurricanes– like in Puerto Rico, you get these hypersaline lakes– and start comparing and contrasting systems and then … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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Natural Prodcast Episode 7: Ben Shen
… get a new one out every two weeks. This time, we’ve got a great interview with Ben Shen, from the Scripps Research … compounds, Alison. They are – if you can imagine – two carbons in a triple bond attached to two carbons in a double … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural …
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Products
… of the product and deliverables as well as target cycle times from sample receipt to completion of standard … Scientific Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …
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New Lineages of Life Group
… that may impact microbiome structure and biogeochemical cycles. Research Team    … Cataloging Earth's microbial lineages through advanced genomic techniques and … reveal new lineages and functional capabilities in the microbial world. … environments, from deep-sea oceanic fluids to hypersaline lakes and hyperthermal springs. This research provides …
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Fungal & Algal Program
… that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … program also explores microeukaryotic members of microbial communities, cataloging gene markers, and producing …
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Natural Prodcast Episode 23: Aaron Puri
… working on it because I really do want you all to hear this great conversation with Aaron Puri. He is an Assistant … to predict or just understand better the language of microbial cell-cell communication. And he told us about his … community. For us, it’s these methane oxidizing bacterial communities that we like to look through as a lens, and …
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Natural Prodcast Episode 18: A CSP Primer
… after listening to this, you think you actually do have a great project that would awesome for a CSP, or if you’re a … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … and work within the DOE emission space of bioenergy, carbon cycling, biogeochemistry, bioproducts. So we cannot …
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Plant Program
… global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, … development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … focusing on how environmental stress and microbial communities affect plant growth and productivity. These …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …
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