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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on …
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DNA Synthesis Program
Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical …
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Offerings & Capabilities
… of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help … the JGI to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as … as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial Genomics. It’s …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is … and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates … three domains of life. It provides tools for analyzing the functional capability of microbial communities based on …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … call is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics …
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Strand-Specific RNA-Seq Analyses of Fruiting Body Development in Coprinopsis cinerea
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … a snapshot of microbial diversity and their metabolic functional potential. This research enables us to better … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … Nayfach S et al.  A …
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