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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in energy, agriculture and ecosystem management. … The Microbial Program focuses on using advanced sequencing …
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Single Cell Research Group
… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … into the phylogeny and coding potential of microbial dark matter. Nature 499, 431-7 (2013). Hess M., Sczyrba A., Egan …
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Metagenome Program
… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … of uncultivated microbial lineages. Charting viral ‘dark matter’:   Viruses are abundant in the biosphere and …
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Microbiome Data Science Team
… host-virus interactions, the exploration of the functional dark matter as well as the development of novel methods to enable … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …
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IMG Group
… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing … Development and maintenance of the Integrated Microbial Genomes (IMG) data management system … As part of …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … ehlersii DSM16337, Xenorhabdus japonica DSM16522 R Robertson, et. al.  2023 . Microbiology Resource …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… features of the compound. For example, lipids– doesn’t matter if it has one extra carbon or two or one less, at the … move a little bit away from that to try to unmask chemical dark matter. And the idea behind this is that, if we … UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how …
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Natural Prodcast Episode 9: Roger Linington
… and that there might be more to be gained than just subject matter, by making that change. So I went to the University … to try and create an open source database of all known microbial natural products. So if you think about natural … products science as a field, we have arguably been studying microbial natural products in an ordered way for perhaps 80 …
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Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”
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Into the darkness: the ecologies of novel ‘microbial dark matter’ phyla in an Antarctic lake
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Plant-Microbial Interactions Group
… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …
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Metabolomics Program
… exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … systems can provide novel insights into the impact of microbial symbionts and their hosts on ecosystems.   … designed to demystify the complexity of dissolved organic matter (DOM) across a variety of environments. ENVnet allows …
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