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… first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … Director of Product and Market Development, Twist Bioscience Scott Clingenpeel: Industrial Hygienist, Berkeley …

… and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … host-virus interactions, the exploration of the functional dark matter as well as the development of novel methods to … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for … to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … environmental viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …

The Community Science Program (CSP) provides the scientific community at … sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to …

The JGI’s Science Programs offer support to users and their research … of user projects, develop cutting edge approaches for and with users, and create computational tools and resources for … the JGI’s impact in advancing both user science and the DOE science mission. Prospective users are encouraged to …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the … is a collaboration between the JGI and the Computational Biosciences Group at the Computing Sciences Research Division …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … our collaborations and capabilities to enable great science that will help solve energy and environmental …

… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome Portal provides unified access to all JGI genomic … over 15 million viral genomes and fragments, enriched with functional annotation, taxonomic classification, and …

The central mission of the JGI’s Genomic Technologies department is   ensuring users … access to cutting-edge capabilities to help advance their science by generating data in three overarching categories: … Synthesis and Metabolomics. Strong internal collaborations with  Science Programs and  Operations enable the JGI to …