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The JGI’s Microbial Program focuses on using cutting-edge sequencing, … addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …

The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … the JGI’s impact in advancing both user science and the DOE science mission. Prospective users are encouraged to …

… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome Portal provides unified access to all JGI genomic …

The Community Science Program (CSP) provides the scientific community at … sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to …

… and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … discussion with the JGI Plant Genome Advisory Committee and DOE, designating a set of JGI plant genomes that are the most important to DOE mission and plant science. These species form the basis of plant research in …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the … is a collaboration between the JGI and the Computational Biosciences Group at the Computing Sciences Research Division …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for … to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the Biological and … a sustainable bioeconomy. ALL PROPOSALS must support the DOE/BER Mission Areas we serve, see below.  … The U.S. …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable … our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … environmental viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …