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User Advisory Committees
Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek … in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input and … effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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Data Policy
Data produced and released by the US Department of Energy … Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and … for the remainder of this policy) produced through all user projects accepted FY22 and later through the Community …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data … annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze data on scales …
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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any work can begin, including the … of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … others: indemnification, patent rights, rights in technical data, project reporting to the DOE, and publication …
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User Programs
… of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS CSP … that integrate the expertise and capabilities of multiple user facilities Investigators with DOE mission-relevant … and must use a variety of capabilities at two or more user facilities. Proposals must be preceded by Letters of …
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User Support
… science. DOE JGI Project Managers collaborate with users to develop project requirements, define the scope of … Project Manager will facilitate project execution by: Metadata verification and coordination with IMG , GOLD and others for data annotation and submission Tracking, monitoring and …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce … publications, and include proposal Award DOIs following the guidelines below.  … If you use data from 3 or fewer JGI …
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Project Management Office
… to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. … of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …
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Metabolomics Program
… molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … advanced mass spectrometry techniques and computational tools, the program supports foundational research related to … recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics Platform delivers rich …
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Synthesis
The team has three subgroups: Synthetic Biology Lab : a user science group dedicated to user project design, … group and focused on new technologies and optimizing tools — including strain engineering — to make them more … Synthetic Biology Informatics Group : a team that develops data science tools for workflow management and novel …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities … offered, proposal review procedures and the annual user meeting. The UEC also acts as a liaison to the user …
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User Executive Committee Charter
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities …
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