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… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … the capabilities that we offer get updated on a regular basis as some of the more boutique, I’m going to call them, …

… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …

The CSP New Investigator Call is for investigators and research … initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … synthesis and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily …

… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … target is based on 98% of the total available hours.   FY 2021 DOE Metrics There were 2,180 unique* JGI users in FY2021 , which includes Principal Investigators (PIs), Co-PIs, …

See below for examples of successful Letters of Intent to our Community Science … Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures … …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … Sai Prahabkar (UC Merced Intern) … Plant / Bacteria / Viral Interactions … Single-cell characterization of …

… works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT enables industry engagement through three primary routes:  … The CSP provides the scientific community at large with access …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … of terrestrial biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key … genomic datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria …

… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … GEBA-type strains project ), the delineation of host-virus interactions, the exploration of the functional dark matter … bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science … for which JGI has not yet received samples as of Sep 30, 2021 are subject to a 2-year embargo to maintain the …