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Natural Prodcast Episode 18: A CSP Primer
… … DAN UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … today. Mostly, I think it all comes to explaining what a CSP is, how you apply for and get one, and what happens once …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform … genomic information into biological function.  The emphasis is on projects leveraging JGI’s DNA synthesis and … may be submitted to the JGI at any time using a simple web-based form and are reviewed annually. For accepted proposals, …
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CSP Large Scale Call
… biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of … .  While applications will be accepted that address any aspect of these mission areas, priority will be given to … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …
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Examples: Successful LOIs & Submissions
Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … … Adaptive strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic …
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Partnerships Development Team
… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access … advantages for farmers concerned with improving sustainable soil management practices. … In June 2020, the Department of Energy announced the  2020 TCF …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % … target is based on 98% of the total available hours.   FY 2020 DOE Metrics There were 2,038 unique* JGI users in FY2020 , which includes Principal Investigators (PIs), Co-PIs, …
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User Programs
… to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING …
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission process. You … in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release …
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New Lineages of Life Group
Nature Reviews Microbiology 20 (5), 255-255 Schulz et al. (2020) Giant virus diversity and host interactions through … Schulz et al. (2020) Advantages and limits of metagenomic assembly and binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Schulz …
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Metabolomics Program
… also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental … the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical … samples — including microbes, fungi, plants and soils. Through a combination of experimental workflows and …
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Microbiome Data Science Team
… important biotechnological applications (e.g., new CRISPR-Cas variants and new CRISPR-Cas types) (Nature Communications … resistance. Cell . 184(13):3376-3393 Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from … Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and host interactions through …
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