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Natural Prodcast Episode 18: A CSP Primer
If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison Takemura, … listener, then you’ll recognize this material, though my show is a little more free-form, and this is the longer cut … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and …
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CSP Large Scale Call
… bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and … cycling, and biogeochemistry — questions of relevance to DOE’s Office of Biological and Environmental Research … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have … and PacBio sequencing workflows and provide guidance as to how to perform sample QC prior to shipment: Importance of …
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How To Use Our Systems
Looking for information on our software, including BBTools ? Click to find that on our archive site.  …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … interactions for improved growth at elevated temperatures … Adaptive strategies in a cosmopolitan and abundant soil …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … studies. These efforts seek to improve understanding of how fungi and algae contribute to ecosystems and industries. …
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User Programs
Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to JGI resources, as well as … industry engagement through three primary routes:  … The CSP provides the scientific community at large with access … improving sustainable soil management practices. … In June 2020, the Department of Energy announced the  2020 TCF …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* … target is based on 98% of the total available hours.   FY 2020 DOE Metrics There were 2,038 unique* JGI users in FY2020 , which includes Principal Investigators (PIs), Co-PIs, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… them enough lately, but as always I have transcripts and show notes at naturalprodcast.com — I went a little overboard … with Christian, I started getting a little bit more into fungi and learning the differences of all the genetic … has been doing work in secondary metabolism. The very first CSP I ever worked on back in Brad’s lab, we talked about it …
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