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The JGI’s Microbial Program focuses on using cutting-edge sequencing, … enhances our understanding of terrestrial biogeochemical cycling and inter-organismal interactions. These insights … with microeukaryotes. The program also studies giant viruses. Key research areas include terrestrial …

… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … and coastal. But we’ve kind of shied away from the ocean. Microbes. We’ve done those in the past, but the DOE …

… to unravel functional capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, and biogeochemistry — questions of … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …

… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … interactions. ISME J.   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

The CSP Functional Genomics call is to enable users to perform …

… (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from … ( GEBA-type strains project ), the delineation of host-virus interactions, the exploration of the functional dark … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …

… archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … contribute to critical processes such as carbon cycling, nutrient cycling, and energy flow. One of the key goals of …

… and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical processes, …

… the return-to-work plan in response to the pandemic.   FY 2019 Number of Unique Users There were 1,933 unique* JGI users in FY2019 , which includes Principal Investigators (PIs), Co-PIs, … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …

… went on to advance basic science by sequencing scores of microbial species as well as several model organisms and … program in the DOE’s Office of Science. In December 2019, the JGI relocated to the newly-built Integrative … mission objectives. Fungi, algae, bacteria, archaea, viruses, and microbial communities of interest to the JGI as …

Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer of marine … powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no … paste. I mean, we tried really hard to think about what nutrients were available the ocean, translate that into a …