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The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate …

… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … to find info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these … proposals that are really multifaceted, that do request a diversity of the different capabilities that we have, that …

… production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial … emphasis that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

… (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from … of host-virus interactions, the exploration of the functional dark matter as well as the development of novel … Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from uncultivated genomes of the global human gut …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … Microbial …

… the return-to-work plan in response to the pandemic.   FY 2019 Number of Unique Users There were 1,933 unique* JGI users in FY2019 , which includes Principal Investigators (PIs), Co-PIs, … % of Goal Goal (hours)** Actual Total Actual % Goal FY 2019 Total 242.0 326.490 134.9% 8,584 8,712 101.5% Q1 2019 …

… elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, … a snapshot of microbial diversity and their metabolic functional potential. This research enables us to better …

… still persists to date. Research Team    … Phylogenetic diversity estimates show that the gap between cultivated and … means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to … cells are characterized and selected as based on a specific functional trait or phenotype of interest, prior to and in …

… microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, … cutting-edge metabolomics with genomic data to gain insights into how small molecules function within plants, … with gene expression, providing deeper insights into functional genomics. A key focus is understanding the …

Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial … Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. 10.1016/j.tim.2019.03.003 Eloe-Fadrosh, Emiley A. et al. (2016)  …

… cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and … three domains of life. It provides tools for analyzing the functional capability of microbial communities based on …