Search

… months, you’re going to hear my last interview with my co-host Alison Takemura, who’s moved on from JGI to do real … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … today. Mostly, I think it all comes to explaining what a CSP is, how you apply for and get one, and what happens once …

… critical minerals and materials, inter-organismal interactions, and predictive biology, modeling and biodesign … For the CSP Large Scale call, a Letter of Intent (LOI) is required … work will NOT be considered under this program. Plant pathogens will only be considered if they are of relevance …

… The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

… The CSP Functional Genomics call is to enable users to perform …

… of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This … characterization of molecular mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … population level. To fully characterize the range of virus-host interactions occurring in microbiomes, these omics data …

… of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), … (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from … GEBA-type strains project ), the delineation of host-virus interactions, the exploration of the functional dark matter …

… fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a … in a myriad of bacterial strains, whereby they can modulate host metabolism, gene expression and phenotype. We have … of these phage genes is the modulation of their bacterial host to colonize plant roots, as with Arabidopsis thaliana. …

… the return-to-work plan in response to the pandemic.   FY 2019 Number of Unique Users There were 1,933 unique* JGI users in FY2019 , which includes Principal Investigators (PIs), Co-PIs, … Goal   Goal (hours)**   Actual Total   Actual % Goal   FY 2019 Total   242.0 326.490 134.9% 8,584 8,712 101.5% Q1 2019 …

… Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures … networks governing terpenoid-mediated plant environment interactions to enable advanced bioenergy crops …

… project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s … So a lot of my work is as focused on insects As a host, and a little bit of my newer work is focused on … and seeing what kind of activity they might have against pathogens from the clinic. At that point, isolates get …

… MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As much as we incorporate loads of different … recently published papers was about doing this with human pathogens. And I had an undergrad in the lab who was just …

… E. A., Kyrpides N. C., Woyke T . Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): …