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… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can … proposals that are really multifaceted, that do request a diversity of the different capabilities that we have, that …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis …

The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel … emphasis that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

… the return-to-work plan in response to the pandemic.   FY 2019 Number of Unique Users There were 1,933 unique* JGI … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – … developing new experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – …

… the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial … Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … research.  These efforts include exploration of the global diversity of alternative genetic codes (Science 2014), … (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved … interactions. ISME J.   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria …

… program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … program in the DOE’s Office of Science. In December 2019, the JGI relocated to the newly-built Integrative … … Microbes constitute the largest reservoir of biodiversity and functional versatility on Earth. Their …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User … in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … Microbial …

… elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … sequencing of microbial communities to uncover the complex interactions and functions that shape ecosystems. By … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for … and biogeochemistry. This research helps translate their genomic potential into practical applications, including … harnesses cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and …