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… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … I think for Natural Prodcast, I think the question that generally comes up that people come to me asking like is– … scale is pretty unique in that we don’t just sequence one microbe for you, we sequenced thousands for you or thousands …

The CSP Functional Genomics call is to enable users to perform … and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … and track record of the applicant.  Learn about the general review process or find details on the internal …

A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable … to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … of next-generation biofuels by studying perennial grasses and fast-growing trees as renewable energy …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … and track record of the applicant.  Learn about the general review process or get details on the internal …

… approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon and … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required … and track record of the applicant.  Learn about the general review process or get details on the internal …

… techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … of terrestrial biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key … energy and ecosystem management. The program aims to generate high-quality genomic datasets, particularly for …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures … …

… include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of … hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important … and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in the group include …

… single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … bioenergy plant single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the … Sai Prahabkar (UC Merced Intern) … Plant / Bacteria / Viral Interactions … Single-cell characterization of …

… metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … processes, development of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial for …

… target is based on 98% of the total available hours.   FY 2018 DOE Metrics There were 1,882 unique* JGI users in FY2018 , which includes Principal Investigators (PIs), Co-PIs, … % of Goal Goal (hours)** Actual Total Actual % Goal FY 2018 Total 200,000 225,299 112.6% 8,584 8,688 101.2% Q1 2018 …

… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … oftentimes will bind to receptors within biosynthetic gene clusters. Specifically, these are Tet repressors that … But what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this …