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The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … genome sequencing of underexplored bacterial and archaeal lineages that are important for bioeconomy applications. By …

… and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate … et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 (7795), 432-436 …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … While uncovering the metabolic potential of uncultivated lineages is of high value to establish models and … C., Woyke T . Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 …

… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing … to confidently assign species to nearly 326 genomes. Through the analysis of cliques, it has also become possible …

… and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … was our first paper . It was definitely interesting going through the whole process of submitting, getting feedback , …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … ecosystems. … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover … searches to expand representation of uncultivated microbial lineages. Charting viral ‘dark matter’:   Viruses are …

… the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the … of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance genome … will be chosen based on scientific merit, judged through independent peer review, and evaluated based on their DOE …

… for improving fungal genomic resources empower students through isolation and genome sequencing of new fungal … The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 … materials and bioinformatics exercises are freely available through the links below. Naturalist Myco Ed Fungal Genomics …

… and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot …

… studying Amazon ecology, [in] Portuguese, and got to do an independent study on ethnobotany of some of the plants that … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … could go down that route.  DAN: So the sun pierces down through the ice pretty well, is that right?  MARCY: It …

… notes, which you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme … in the cave project just now switching from intermicrobial interactions, studying intermicrobial interactions …