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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi … to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … The Fungal & Algal Program harnesses cutting-edge sequencing technologies and advanced genomic …
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Partnerships: Myco-Ed
… Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … Beyond providing a scalable solution for production of high-quality …
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Fungal & Algal Program User Advisory Committee
… The Fungal & Algal Program Advisory Committee is chartered by …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex …
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DNA Synthesis Program
… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus …
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … Plant microbiomes hold the amazing ability to influence plant development, fitness and … expand beyond this model system by identifying phages and characterizing this multipartite phenomenon in additional …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality …
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Frequently Asked Questions: Project Management
… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry based metabolomics Below is a … Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … are working on a tool to encourage community support with characterizing  fungal conserved genes families of unknown …
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