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… driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal … based on their metagenome sequence, in the context of reference isolate genomes included from the IMG/M system. … …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … favorite topic in, arguably, my area of expertise, which is genome mining. You’ll hear us talk about what it is, hear me … from the GEM catalog (in green) and previously existing reference genomes (in gray). Around the phylogenetic tree, …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … similarity to a gene cluster with a known compound from the reference database: It must be identical. It must be that … on and inside the roots are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … with plants (mycorrhizae, endophytes, growth promoters, or pathogens) and as the most efficient degraders of plant … growth of biofuel feedstock and fungi, as symbionts, pathogens, and biocontrol agents dramatically affect plant …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to …

You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … and seeing what kind of activity they might have against pathogens from the clinic. At that point, isolates get … you have is linked to the killing you see against the pathogen is new or something you’ve seen before. DAN: Yeah, …

… the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… on our YouTube channel as well as in this episode of our Genome Insider podcast.  You can also contact … range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, …

… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … based on their metagenome sequence, in the context of reference isolate genomes included from the IMG/M system. … …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … So, well, two things. My PhD work was with a fungal pathogen called Cochliobulis heterostrophis . This is a very … of me is a natural product person, but the other half is a pathogenesis person, where I work with pathogens and always …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … boss is Nigel Mouncey, and he’s the director of the Joint Genome Institute. And so anybody who’s listened to other … that is active against Sartoria which is a really big pathogen of wheat in cereal crops in Europe. And the …

… listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public projects on the JGI Genome Portal . The PI and all authorized users can also … of publicly available projects can be accessed via the Genome Portal , at the following sites: Microbes: IMG …