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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith … You can visit the Products & Offerings section of our website for more details, including a downloadable …
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Project Management Office
… The JGI Project Management Office carries out a number of activities … PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working … formal User Agreement, and ultimately launching the user’s project. See below for details on each step. …
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Projects
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … ; click on the call link to see specific details including project types supported, sample/capacity limits, and …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …
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Natural Prodcast Episode 18: A CSP Primer
… is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So … amount that they can request. So the minimum request is 100 kb. The maximum request is 500 kb. DAN UDWARY: For DNA …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching …
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Fungal & Algal Program
… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This …
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Metagenome Program
… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … And so when I came into graduate school, I worked on that project. And it was working exactly that same kind of way, … of orgasms. And so we have all of that information. We have 100,000 or really about 87,000 what looked to be novel …
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DOE Metrics
… counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) … % Goal   FY 2025 Total   700.0 1,144.186 163% 8,585 8,640 100.6% Q1 2025 175 190.304 109% 2,164 2,136 98.7% Q2 2025 … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse … biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key … with isolate collections to complete large-scale sequencing projects, including 10,000 Actinomycetota strains and 10,000 …
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