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Single Cell Research Group
… of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches in the … begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to decipher … Jensen G. J., Kyrpides N. C., Koonin E. V., Woyke T . Giant viruses with an expanded complement of translation system …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. …
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Micro-Scale Applications Group
… and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first … (BONCAT+FACS). To provide additional functional insights into microbial genomes, the JGI now uses laser …
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Viral Genomics Group
… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … in virus:host interaction and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of … ISME J.   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria and archaea across …
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New Lineages of Life Group
… of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Schulz et al. … of life. Microbiome. 5 (1), 1-6 Schulz et al. (2017) Giant viruses with an expanded complement of translation system …
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Plant-Microbial Interactions Group
… symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of … We are using these methods to understand how plant cells respond to low nutrient conditions (low nitrogen or …
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Natural Prodcast Episode 7: Ben Shen
… for every episode we put out. I actually put a lot of time into preparing those transcripts, so I hope somebody’s going … of electrons that becomes really reactive. And so, different types of enediyne molecules can bind to different … is always associated with toxicity, basically, killing cells. ALISON: Right, because they’re so reactive. BEN: …
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Metagenome Program
… archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and … govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, with … microbial lineages. Charting viral ‘dark matter’:   Viruses are abundant in the biosphere and influence …
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Natural Prodcast Episode 1: The Primer, Part 1
Secondary Metabolites Science Program, which I was hired into, and my job is to do cool research, and also to talk to … they figured out that they could culture the plant cells and produce enough that way in really large like 7500 … experience some natural products now but maybe that’ll be a different episode. I mean, I’m sure we are experiencing some …
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Microbial Program
… with microeukaryotes. The program also studies giant viruses. Key research areas include terrestrial … distribution. These are derived from isolates and single cells. This effort uncovers novel genes, protein families, … interactions: In an effort to gain insights into the interactions between microbial organisms and how …
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Phage-specific metabolic reprogramming of virocells
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Environment-specific virocell metabolic reprogramming
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