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Understanding Wildfire Recovery, Starting in Soil
… look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a … extreme wildfires, more and more forests are under threat. Understanding which microbes in the soil persist after a …
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Metabolomics Program
Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems … the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … has recognized how important natural products are to understanding the natural environment, and so our Director, … is a chemical compound called geosmin that’s produced by soil bacteria that live all over the place. So that smell of …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … those associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and … addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first … a lot of people hedge their way into natural products by starting out in synthesis and then discovering more-- … can do these small rings, and so I think we need a better understanding of that. We have a crystal structure, and …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing the energy and … at UC Berkeley is a program designed to foster a profound understanding of research methodologies within the realm of …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to … and a thriving future. … The Plant Program advances our understanding of plants’ biological and ecological roles to …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … actually can learn just by really digging into the data and understanding what’s going on there. And now, that’s all I … of these environments? NADINE ZIEMERT: So we started with soil. But we also have, in collaboration with other people, …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … step for many projects at the JGI. The quality of the starting material is one of the greatest predictors of a …
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that … metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse … they grow, as well as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … sustainability, and many other applications. By understanding how microbes contribute to ecosystem … integrated context.  … The IMG/VR system serves as a starting point for the analysis of viral genome fragments …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome … for antibiotics and the microbes that make them is in the soil. There’s … uh… there’s an issue there though, in that … for many millions, sometimes billions, of years. And understanding how those changes that evolution brokers are …
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