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Testing Progress report
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DOE Metrics
… target is based on 98% of the total available hours.   FY 2022 DOE Metrics There were 2,243 unique* JGI users in … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress developing new experimental capabilities to analyze …
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Frequently Asked Questions: Proposal Submission
… letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call … applicants from any institution type and at any career stage. Generally, most users are able to work with Berkeley … If your project makes it successfully through the scientific review and is selected, we will provide you with …
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Microbiome Data Science Team
… and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … with geNomad. Nat Biotechnol . Epub. Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse …
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New Lineages of Life Group
… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of … an expanded complement of translation system components. Science, 356 (6333), 82-85 Schulz et al. (2016) A …
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Natural Prodcast Episode 23: Aaron Puri
… is doing some cool stuff with cool bacteria that I’m fascinated to learn more about. He works with methylotrophs, … bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a … tundripaludum is my favorite and is again, maybe highlighting the people-centric aspects of the broader field …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… transcripts, and show notes with links to papers around the science we talked about, at natural prodcast dot com. So, … allow that to bind. Your receptor also typically has some tag so that you can then pull down the receptor with that … Understanding of Natural Product Induction Betsy's lab webpage and the page on the From Microbes to Medicines outreach …
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2022 Progress Report
Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National … (Berkeley Lab), is to become the leading integrative genome science user facility enabling researchers to solve the …
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Natural Prodcast Episode 18: A CSP Primer
… the Joint Genome Institute is a “Department of Energy user science facility”, and so today what you’re going to hear … show notes, which you can always access through JGI’s webpage at  naturalprodcast.com , along with transcripts and … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow …
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Natural Prodcast Episode 14: Nigel Mouncey
Genome Institute and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … product. And it really helped us, I think, accelerate the progress. And we were several years ahead of plan with …
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Progress Reports: 2002–2020
Click the cards below to view downloadable pdfs of previous Progress Reports from the Joint Genome Institute.  … FY20 Progress Report … FY19 Progress Report … FY18 Progress …
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Plant Program
… by environmental change, focusing on plant resilience — highlighting the vulnerabilities of monocultures and the … that are the most important to DOE mission and plant science. These species form the basis of plant research in … accessions) and protocols (transformation, crossing, mutagenesis) are available to the community.   … EcoFABs link …
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