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The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … … The Fungal & Algal Program harnesses cutting-edge sequencing technologies and advanced genomic analysis to …

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has allowed the JGI to increase …

… the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not … We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma … We are also utilizing DNA-Affinity Purification (DAP) sequencing to express hundreds of transcription factors and …

… resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The … into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … material is one of the greatest predictors of a successful sequencing project. It is imperative that users properly … nucleic acid quantification in our Illumina and PacBio sequencing workflows and provide guidance as to how to …

… any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by … for Federal Agencies , DNA Synthesis Appendix  and DNA Sequencing Appendix are available for download.)  After your …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours …     Q4 2025 175     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on … even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) Operating Hours …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis … of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw … have been  discontinued , including smRNA, bisulfite sequencing, and ChIP-seq. … Scientific Program Product …

… marine organisms. Except during the time that we worked in fungi. But what do you see as the overall theme of your … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And … doing was pursuing with Jacques Ravel, at TIGR, metagenome sequencing, which was very early days for that technology. …

… — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and bacteria to …

Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative … is a link in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the … the zoospores were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both …