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Project Management Office
The JGI Project Management Office carries out a number of activities … formal User Agreement, and ultimately launching the user’s project. See below for details on each step. … Please review …
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Projects
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Frequently Asked Questions: Project Management
Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics projects: …
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How to Submit Sequencing Samples
… the process. If you have any questions, please contact your Project Manager or jgi-project[email protected] . … 1) … mass prior to shipment to the  JGI. The documents below (posted with permission) demonstrate the importance of proper … Sample QC Protocol JGI’s Total RNA Sample QC Protocol JGI’s Small RNA Sample QC Protocol DNA Extraction 101 : tips, …
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Microbial Program
… to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with … to explore microbial diversity — with an emphasis on bacteria and archaea, and including those associated with … with isolate collections to complete large-scale sequencing projects, including 10,000 Actinomycetota strains and 10,000 …
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Secondary Metabolites Program
… focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which … realized under standard laboratory conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being … Prodcast … Secondary Metabolites Program in Detail … Projects and Initiatives … Secondary Metabolites Program …
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Natural Prodcast Episode 8: Eric Schmidt
And a lot of us moved on to work in simpler systems, like bacteria, where we figure we can make more progress faster, … chains of amino acids. “Peptide” is just another word for a small protein. And it turns out that a lot of natural … so I’m hoping we can follow up with him again as the project progresses! If you’re interested in RiPPs, I’ll put …
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Natural Prodcast Episode 16: Marcy Balunas
… about something I can kind of see like the squid and the bacteria and how the chemistry is going back and forth … and helping to concentrate it. But that’s the next project.  DAN: Thanks.  ALISON: We had talked a little bit … chemistry but I think that’s not necessarily – There are small molecules that host make as well. And so hosts and …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … metabolomics with genomic data to gain insights into how small molecules function within plants, microbes, and … and Gene Integration … Metabolomics Program in Detail … Projects and Initiatives … Metabolomics Program Head … …
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Metagenome Program
… in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along with their … to information regarding genome and metagenome sequencing projects, and their associated metadata, around the world. … … Data Collaborative … Metagenome Program in Detail … Projects and Initiatives … Please contact Emiley …
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Plant-Microbial Interactions Group
… cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and … This is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a … 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos …
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Natural Prodcast Episode 19: Bill Fenical
… why it’s so hard to succeed, and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary metabolism of some more novel marine bacteria. You know, I first met Bill as a postdoc working … a company, here in La Jolla, called Nereus Pharmaceuticals, small biotech. And that’s a whole other story, biotechs. But …
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