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Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential …

… letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call … view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you … applicants from any institution type and at any career stage. Generally, most users are able to work with Berkeley …

… technology in order to enhance the quality of single-cell genomes and directly link functional information with … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical …

… to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … Deputy …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to …

… required documentation here .  … You can request a JGI Single Sign On account at https://signon.jgi.doe.gov . This … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: …

… molecules obviously play a huge role in ecology through cell-cell communication, chemical warfare, and symbiotic … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow cytometry for …

So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … been shown today is it's more a quorum sensing within a single species. DAN: Within a species. Genus? BETSY … allow that to bind. Your receptor also typically has some tag so that you can then pull down the receptor with that …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … Genomics group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host …

… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence … Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a …

… of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level genetic … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These are …

ANI is used to ascertain the species specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within …