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The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … in particular to study inter-organismal interactions. Novel approaches are being explored to predict microbial …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … ecosystems and their evolution. The Program focuses on developing computational tools and visualization resources … most pressing challenges. … Exploration of phylogenomic novelty: Advances in metagenomic sequencing, assembly and …

… going with us that we want to talk a little bit about. It’s sort of early stages. But I think that is emblematic of some … months of salary and a lousy job with no future. And let’s see what you can do. So with that nine months of salary, I … it too had something unusual that we began thinking about developing. And the company, Nereus, of course, which we …

… in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … insights through metagenomic analysis of a microbial consortium. Nature 443, 950-5 (2006). … Research Interests … …

… using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize … … The JGI provides users access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover … aggregates after first imaging with various microscopy techniques … Stable isotope probing metagenomics: … Single …

… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research …   … The Integrated Microbial Genomes group is focused on:  Developing state-of-the-art data processing and analysis … the metadata requirements for integrating data into IMG/M (see IMG/M submission site ). The Integrated Microbial …

… genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass spectrometry techniques and computational tools, the program supports …

… vision for secondary metabolism, his past in industry in developing natural products for agriculture, and his … because my kids have no interest as far as I can tell. They see me every once in a while grow some plates in– [LAUGHTER] … of countries that we were selling products into, the sort of extended range of applications into companion animal …

… the rest of a natural product molecule around that. That’s sort of a semi-stable configuration of electrons that … its potential application in human medicine. And so, we are developing enabling technology, not only to facilitate the … produced. So I think that I’m excited for everything that seems like, you know, falling into the right place. DAN: …

… of the functional dark matter as well as the development of novel methods to enable large-scale comparative analysis, … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … D. et al. (2017) IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses.  Nucleic Acids Res. …

PROPOSALS must support the DOE/BER Mission Areas we serve, see below.  … The U.S. Department of Energy (DOE) Joint … went on to advance basic science by sequencing scores of microbial species as well as several model organisms and … of almost all plastics. This drives the DOE’s focus on developing lignocellulosic biomass as a clean, renewable and …