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The JGI’s Microbial Program focuses on using cutting-edge … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … The program aims to generate high-quality genomic datasets, particularly for uncultivated microorganisms, by sequencing …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative … analysis through the IMG/M platform. Further, the JGI partners with the National Microbiome Data Collaborative ( …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … scientists to drive innovations that align with DOE's missions. … The DNA Synthesis Program plays a central … of construct design, building, and characterization. In partnership with the Joint BioEnergy Institute (JBEI), we …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … discussion with the JGI Plant Genome Advisory Committee and DOE, designating a set of JGI plant genomes that are the …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … the critical roles of metabolites in living systems, particularly as they relate to DOE missions in the bioeconomy, sustainability, and …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … million species, are essential for ecosystem functioning — particularly in their roles associated with plants … an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … Microbial Genomes (IMG) data management system … As part of this project, pairwise average nucleotide identities … within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … current and future developments, and how the JGI can be part of that space. … Secondary Metabolism Collaboratory … …

Research in the Woyke laboratory focuses on the utility of … data is critical to further test such hypotheses. In particular during an era of ‘homology creep’, function …

… synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … metabolomics and synthesis on behalf of the U.S. Department of Energy Bioenergy Research Centers.  The Centers …

… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to …