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… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional … Microbial Genomes group is focused on:  Developing state-of-the-art data processing and analysis pipelines for the …

… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … quantitative analysis strategy for stable isotope probing metagenomics . mSystems , …

Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … before my senior year of college, a chance to go to the Amazon and work with a traditional healer as a volunteer … of a time where obviously humans are facing the health consequences of our destructive nature against planetary …

… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … studying ethnobotany in Brazil.  And so I went to the Amazon rainforest and talked to people who as part of a … computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product diversity and …

… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … on new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – … new experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These …

Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … with various microscopy techniques … Stable isotope probing metagenomics: … Single cell: … For further details, please …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Patrick would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned … the environment you mentioned, you know that they can have consequences to marine life that surrounds it, whether it be …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri … Tringe S.G., Visel A., Woyke T ., Wang Z. & Rubin E.M. Metagenomic discovery of biomass-degrading genes and genomes …