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Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have … and PacBio sequencing workflows and provide guidance as to how to perform sample QC prior to shipment: Importance of …

Looking for information on our software, including BBTools ? Click to find that on our archive site.  …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … studies. These efforts seek to improve understanding of how fungi and algae contribute to ecosystems and industries. …

… all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by … is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of … We are using these methods to understand how plant cells respond to low nutrient conditions (low nitrogen or low …

… the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not … for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … defense, nutrient acquisition and communication. Studying how these compounds are biosynthesized and their roles in …

… webinars here . You can find additional webinars covering how to use our data portals here.  … … Shining a Light: Advanced Photon Source Capabilities for FICUS Research shows researchers how to tap into the capabilities of the …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … biosynthetic pathway, and I’ll have to do a whole show on it one of these days. If you listen to the Nancy … marine organisms. Except during the time that we worked in fungi. But what do you see as the overall theme of your …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … natural chemical compounds that you find in plants, fungi and bacteria, basically all living things. When your … talking about here. JGI, as an institution has recognized how important natural products are to understanding the …

… and have a great chat with him.  I kind of lost count of how many times Brad used the words “fun” and “magical” when … understand fundamentally what’s going on in the cell as it responds to its ocean environment. And as we understand that … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …

… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I … in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … working on that aspect and it’s quite active against some fungi. But we’re also really interested in distribution. So …

… a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … DNA Synthesis Science Group supports researchers exploring how to convert sequence into functional assessments. The … and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced …

The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall … chemicals. Summary Filamentous fungi are like handymen who show up at a job site for a task that requires a flathead … reconstruct and model the gene regulatory networks as they responded to available carbon sources, which ranged from …