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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity … pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the …
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Data Ecosystem
To expand access to integrated data, improve tools and … genomes to metagenomes to systems-level modeling and understanding. JGI and KBase are designated DOE Office of …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … available genomes from three domains of life, in a uniquely integrated context.  … The IMG/VR system serves as a …
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Microbial Program
Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … The program aims to generate high-quality genomic datasets, particularly for uncultivated microorganisms, by … and their associated metadata, around the world. … Integrated Microbial Genomes and Microbiomes … Integrated …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between … as the rhizosphere), researchers hope this massive and integrated data set will help identify how different …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production … functional genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. … and distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … DOE mission-oriented research and contributing validated datasets to further gene function research. The  Open Green …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters … and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems …
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Natural Prodcast Episode 16: Marcy Balunas
… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … compound that you’ve structurally characterized and you understand what that molecule is then you can start thinking …
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Mission
Office of Science user facility supported by the Biological and Environmental Research program, the Joint Genome … capabilities, large-scale data and professional expertise to support the global research community in studies of … for the U.S. Department of Energy.   The JGI provides integrated high-throughput sequencing, DNA design and …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the … The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … available genomes from three domains of life, in a uniquely integrated context.  … The MycoCosm web portal provides data …
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