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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … Work at Lawrence Livermore National Laboratory was conducted …
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PhycoCosm Tutorial
… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative …
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The Big Deal About Short Plants
… Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest … to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for … data set will help identify how different elements of the ecosystem interact and respond to changes in the … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching …
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Introducing New Members of the JGI User Executive Committee
… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell …
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Work With the JGI! Tips for a Winning CSP Proposal
… The JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine … The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … developed and applied novel computational and experimental sequence-based methods for elucidating the gene regulatory …
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