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The JGI Data Portal: Improving User Experience
… JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal … are more broadly applicable to the download processes from the other JGI Portals, as well. “For thousands of … experience and beginning work on the download experience from MycoCosm and PhycoCosm, with the intent of eventually …
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Building Sphagnum Genomic Resources
… can also act as a protective layer insulating permafrost from the warming regional temperatures. For this reason, the … prevent methane production by routing the carbon away from methanogens. In The ISME Journal, a team led by researchers from the University of Konstanz and the University of …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… found that these enzymes have evolved distinctly from both core and specialized enzymes. Even during … across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, archaea, protist, …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… miles and eight states. In 2021, using switchgrass samples from these gardens, a team led by researchers at the … the effort to generate climate resilient switchgrass. Aside from climate-related studies, researchers have also …
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CSP New Investigator Call
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“A STEM career is in reach and accessible”
… Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with Biotech … to fulfilling science careers, JGI hosted five students from Antioch High School this summer. …
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JGI@25: Strengthening Soybean
… podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis of the French National Institute … in size). So, the JGI helped a consortium of researchers from various institutions, including INRAE as well as the …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… In each garden, switchgrass plants clonally propagated from cuttings represent a diverse collection sourced from half of the United States. As  reported January 27, … common gardens began nearly a decade ago with a proposal from UT-Austin’s Tom Juenger, a longtime JGI collaborator …
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The More the Merrier: Making the Case for Plant Pan-genomes
… base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies from additional parents or duplication, also known as … team studied  Brachypodium hybridum , a polyploid resulting from the combination of the genomes from the diploids  B. …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of … , scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. … Summary The two most common methods for collecting genomes from microorganisms are shotgun (group) metagenomic …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… it’s possible that fungal communities — or enzymes from fungal communities — could pave the way for many … But there’s opportunities for borrowing and porting parts from nature — enzymes, transporters, pathways — into …
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Tina Clarke
… her HR journey after obtaining her BA degree in Psychology from Sonoma State University. Early on, Ms. Clarke knew the … Years later she received her MA degree in Counseling from John F. Kennedy University. As a Mediator she is …
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