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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint … co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the past decade … assistant for the UC Merced Quantitative and Systems Biology department.   Jonelle Basso , a JGI research …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user … of Georgia whose work is at the interface between biology and computer science. Bik and her research group are … strongly committed to communicating the importance of microbiology to the broader community. Eisen has been involved in …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … genomes to a diploid state while retaining multiple copies of some genes. This polyploidization process is ongoing and … Berkeley; Gregor Mendel Institute of Molecular Plant Biology (Austria); Leibniz Institute of Plant Genetics and …
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JGI Announces 2025 New Investigator Portfolio
… You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and … capabilities such as metatranscriptomics and environmental DNA sequencing to explore microbial and plant interactions …
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Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola
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Close association of RNA polymerase II and many transcription factors with Pol III genes
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An Improved Method of RNA Isolation from Loblolly Pine (P. taeda L.) and Other Conifer Species
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Bidirectional titration of yeast gene expression using a pooled CRISPR guide RNA approach
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … play a critical role in the global carbon cycle, and are of significant interest for their potential contributions to … at Montana University and associate director of its Thermal Biology Institute. He’s been investigating methanogenesis …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this polar environment. This cycle suggests a reliance on … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a …
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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … , researchers led by Hal Alper at The University of Texas at Austin and Michael Jewett of Northwestern … are partnering with Yasuo Yoshikuni and Ian Blaby of the DNA Synthesis Science Program . “This collaboration brings …
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