Search

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes … in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they also built a high-quality …

… expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …

… and plant-microbe interactions in various environments to improve crop yield, and developing a platform … technologies unlocking the potential of macroalgae as an environmentally sustainable and cost-effective biomass for … of secondary metabolite biosynthetic gene clusters in bacteria, Cell Chemical Biology , 2022 … R&D100 Award …

… messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our code would …

… for Structural Molecular Biology . … Accessing NEON’s Environmental Sample Archives, Applying JGI and EMSL Omics … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and …

… increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …

… to seek other ways to make morels fruit under artificial environments, a technique to supply exogenous nutrients was … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal …

… research community in studies of complex biological and environmental systems. We optimize our service to the community … 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … to define the structure and function of a unique cyanobacterial protein and understand its role in photosynthesis. …

… partner, either a eukaryotic microalga or a cyanobacteria, is known as the “photobiont.” Photobiont and … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared … Northwest National Laboratory; and by a DOE-Biological Environmental Research grant No FWP 61327 to FRC and PL (for …

… mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and … Tomas Tyml and Frederik Schulz, Eukaryotes in Extreme Environments Theo Loreaux and mentors Simon Roux and Frederik …

… the way, impacting its quality and in turn affecting environmental and human health, energy production and … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established … Energy (DOE) Office of Science, Office of Biological and Environmental Research (BER) grants DE-SC0023084, DE-SC0021350, …