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In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, …

… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is central to our ability to offer … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once …

… in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … assay. The second step consists of RNA sequencing of whole transcriptomes, and the third is determining the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. …

Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal …

… … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …

Internship … Cross Species Integration of Single Cell Transcriptomes … Exploring and Visualizing P. hallii Mutant … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on … Root … Cross Species Comparison of Plant Single-cell Transcriptomes of Rice and Arabidopsis Roots … Making Big …

… appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … “The big surprise of the project was to realize that these genome copies that are spread throughout the whole cell are … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …