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Eight genome sequences of bacterial environmental isolates from Marr Pond, Antarctica
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FISH–FACS Enabled Targeted Recovery of Genomes from Uncultivated Environmental Microbial Populations
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Single-cell genomics reveals complex microbial and viral associations in ciliates and testate amoebae
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Draft Genomes of Geographically Distinct Strains and Progeny of the Ectomycorrhizal Basidiomycete Laccaria bicolor.
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To … to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions … in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Building Wet and Dry Lab Skills
… Summer 2025 marked the second year of Alabama A&M University students … worked with mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  Brachypodium …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change … from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The Blob, … and his colleagues collected more than 270 water samples. Genomic DNA extracted from the water samples were sequenced …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the … said. Informed by other community-driven standards from the Genomic Standards Consortium, Wilhelm and Simpson assembled … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea
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Genomics Characterization of an Engineered Corynebacterium glutamicum in Bioreactor Cultivation Under Ionic Liquid Stress
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