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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, Alan …
Learn more
The Big Deal About Short Plants
… uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short …
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IMG/VR
… the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel capabilities of IMG/VR to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …
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Trent Northen
… 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of … is the Metabolomics Science Program Head at the JGI. Click to learn more about the program's areas of focus, major …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … include the development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … al., 2023. iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses …
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Forming Scientific Connections and Building Community
… Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven graduate … on their summer projects. Watch the short video here to see what they had to say about their experiences and what they’ll take with …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland … nine other JGI users already serving on the UEC – go here to view the full roster of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies …
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Work With the JGI! Tips for a Winning CSP Proposal
… The JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and it’s open to scientists at any career stage, anywhere in the world, for free. We accept new projects related to energy and the environment several times a year. A few …
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Year in Review: JGI’s 2018 Progress Report Available Now
… own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and to better understand their roles in the global sulfur cycle. …
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JGI Welcomes New UEC Members
… policies and practices that affect users and their access to technical capabilities JGI offers, as well as proposal … the organization of the JGI Annual Meeting. Any investigator who has been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and can serve no …
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JGI-UC Merced Interns Share Their 2021 Experiences
… UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science … further along in their academic career enjoyed the chance to develop new skills needed for their PhD research. And for … Evolution of the Mitochondria Internship …
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